RNA–Protein interactions for RNA: ENST00000504287.1

LINC02488-201, Transcript of long intergenic non-protein coding RNA 2488, humanhuman

TSL 2 BASIC

Gene LINC02488, Length 652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02488-201ENST00000504287 AEBP2Q6ZN18 517 aaPredicted RBP35.18■■■■□ 3.22
LINC02488-201ENST00000504287 CHIC1Q5VXU3 224 aa34.21■■■■□ 3.07
LINC02488-201ENST00000504287 PHF23Q9BUL5 403 aaPredicted RBP30.1■■■□□ 2.41
LINC02488-201ENST00000504287 SENP3Q9H4L4 574 aaPredicted RBP29.84■■■□□ 2.37
LINC02488-201ENST00000504287 FOXD1Q16676 465 aa27.72■■■□□ 2.03
LINC02488-201ENST00000504287 PLPPR3Q6T4P5 718 aa27.69■■■□□ 2.02
LINC02488-201ENST00000504287 PPP6R1Q9UPN7 881 aa26.58■■□□□ 1.85
LINC02488-201ENST00000504287 ADRA2BP18089 450 aa26.51■■□□□ 1.83
LINC02488-201ENST00000504287 PIAS4Q8N2W9 510 aaPredicted RBP26.05■■□□□ 1.76
LINC02488-201ENST00000504287 MSH5O43196 834 aa25.59■■□□□ 1.69
LINC02488-201ENST00000504287 PPP4R3CPQ6ZMV5 832 aa24.38■■□□□ 1.49
LINC02488-201ENST00000504287 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
LINC02488-201ENST00000504287 MAPK8IP2Q13387 824 aaPredicted RBP24.09■■□□□ 1.45
LINC02488-201ENST00000504287 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
LINC02488-201ENST00000504287 CNKSR2Q8WXI2 1034 aa23.73■■□□□ 1.39
LINC02488-201ENST00000504287 KCNA4P22459 653 aa23.67■■□□□ 1.38
LINC02488-201ENST00000504287 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
LINC02488-201ENST00000504287 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
LINC02488-201ENST00000504287 NPM3O75607 178 aaKnown RBP23.38■■□□□ 1.33
LINC02488-201ENST00000504287 RNF216Q9NWF9 866 aaPredicted RBP23.32■■□□□ 1.32
LINC02488-201ENST00000504287 HOXD11P31277 338 aaPredicted RBP23.29■■□□□ 1.32
LINC02488-201ENST00000504287 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
LINC02488-201ENST00000504287 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.21
LINC02488-201ENST00000504287 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
LINC02488-201ENST00000504287 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
LINC02488-201ENST00000504287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.13
LINC02488-201ENST00000504287 RNF39Q9H2S5 420 aa21.96■■□□□ 1.11
LINC02488-201ENST00000504287 ZBTB22O15209 634 aa21.82■■□□□ 1.08
LINC02488-201ENST00000504287 FOXD4L1Q9NU39 408 aa21.81■■□□□ 1.08
LINC02488-201ENST00000504287 U3KPZ7 1027 aaPredicted RBP21.8■■□□□ 1.08
LINC02488-201ENST00000504287 C1QBPQ07021 282 aaKnown RBP21.67■■□□□ 1.06
LINC02488-201ENST00000504287 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
LINC02488-201ENST00000504287 MYCNP04198 464 aaPredicted RBP21.59■■□□□ 1.05
LINC02488-201ENST00000504287 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
LINC02488-201ENST00000504287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
LINC02488-201ENST00000504287 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
LINC02488-201ENST00000504287 CACNB1Q02641 598 aaPredicted RBP21.38■■□□□ 1.01
LINC02488-201ENST00000504287 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
LINC02488-201ENST00000504287 APLP2Q06481 763 aa21.21■□□□□ 0.99
LINC02488-201ENST00000504287 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
LINC02488-201ENST00000504287 ATXN8OSP0DMR3 200 aa21.11■□□□□ 0.97
LINC02488-201ENST00000504287 CAPN15O75808 1086 aa21.05■□□□□ 0.96
LINC02488-201ENST00000504287 ATF5Q9Y2D1 282 aaPredicted RBP21.04■□□□□ 0.96
LINC02488-201ENST00000504287 ZNF219Q9P2Y4 722 aaPredicted RBP20.97■□□□□ 0.95
LINC02488-201ENST00000504287 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
LINC02488-201ENST00000504287 DSG3P32926 999 aa20.83■□□□□ 0.93
LINC02488-201ENST00000504287 ABCB7O75027 752 aa20.66■□□□□ 0.9
LINC02488-201ENST00000504287 POLA2Q14181 598 aa20.6■□□□□ 0.89
LINC02488-201ENST00000504287 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
LINC02488-201ENST00000504287 MKRN4PQ13434 485 aaPredicted RBP20.14■□□□□ 0.81
LINC02488-201ENST00000504287 FBLN2P98095 1184 aa20.09■□□□□ 0.81
LINC02488-201ENST00000504287 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
LINC02488-201ENST00000504287 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
LINC02488-201ENST00000504287 SPDYE2BA6NHP3 402 aa19.72■□□□□ 0.75
LINC02488-201ENST00000504287 SPDYE6P0CI01 402 aa19.72■□□□□ 0.75
LINC02488-201ENST00000504287 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
LINC02488-201ENST00000504287 SSUH2Q9Y2M2 353 aa19.6■□□□□ 0.73
LINC02488-201ENST00000504287 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.72
LINC02488-201ENST00000504287 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
LINC02488-201ENST00000504287 SPDYE4A6NLX3 237 aa19.55■□□□□ 0.72
LINC02488-201ENST00000504287 FKBP8Q14318 412 aa19.42■□□□□ 0.7
LINC02488-201ENST00000504287 REM2Q8IYK8 340 aaPredicted RBP19.37■□□□□ 0.69
LINC02488-201ENST00000504287 PROM2Q8N271 834 aa19.34■□□□□ 0.69
LINC02488-201ENST00000504287 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
LINC02488-201ENST00000504287 PITPNM1O00562 1244 aa19.16■□□□□ 0.66
LINC02488-201ENST00000504287 SPDYE1Q8NFV5 336 aaPredicted RBP19.15■□□□□ 0.66
LINC02488-201ENST00000504287 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
LINC02488-201ENST00000504287 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
LINC02488-201ENST00000504287 STAG3Q9UJ98 1225 aa18.98■□□□□ 0.63
LINC02488-201ENST00000504287 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC02488-201ENST00000504287 PRR29P0C7W0 189 aa18.84■□□□□ 0.61
LINC02488-201ENST00000504287 PIP4P2Q8N4L2 257 aa18.8■□□□□ 0.6
LINC02488-201ENST00000504287 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
LINC02488-201ENST00000504287 CREBZFQ9NS37 354 aa18.65■□□□□ 0.58
LINC02488-201ENST00000504287 PRKAR2AP13861 404 aaKnown RBP18.64■□□□□ 0.57
LINC02488-201ENST00000504287 POTEHQ6S545 545 aa18.61■□□□□ 0.57
LINC02488-201ENST00000504287 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
LINC02488-201ENST00000504287 VASPP50552 380 aaPredicted RBP18.56■□□□□ 0.56
LINC02488-201ENST00000504287 MIER1Q8N108 512 aa18.52■□□□□ 0.56
LINC02488-201ENST00000504287 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
LINC02488-201ENST00000504287 PLCD3Q8N3E9 789 aa18.46■□□□□ 0.55
LINC02488-201ENST00000504287 FARP1Q9Y4F1 1045 aaPredicted RBP18.44■□□□□ 0.54
LINC02488-201ENST00000504287 PLEKHG5O94827 1062 aa18.4■□□□□ 0.54
LINC02488-201ENST00000504287 IFNLR1Q8IU57 520 aaPredicted RBP18.32■□□□□ 0.52
LINC02488-201ENST00000504287 ZBTB47Q9UFB7 747 aaPredicted RBP18.3■□□□□ 0.52
LINC02488-201ENST00000504287 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC02488-201ENST00000504287 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
LINC02488-201ENST00000504287 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
LINC02488-201ENST00000504287 HAX1O00165 279 aa18.16■□□□□ 0.5
LINC02488-201ENST00000504287 NUBP1P53384 320 aa18.15■□□□□ 0.5
LINC02488-201ENST00000504287 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
LINC02488-201ENST00000504287 EVX2Q03828 476 aa18.08■□□□□ 0.48
LINC02488-201ENST00000504287 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
LINC02488-201ENST00000504287 SPOCK2Q92563 424 aa18.08■□□□□ 0.48
LINC02488-201ENST00000504287 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
LINC02488-201ENST00000504287 TSPYL2Q9H2G4 693 aaPredicted RBP17.95■□□□□ 0.46
LINC02488-201ENST00000504287 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
LINC02488-201ENST00000504287 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
LINC02488-201ENST00000504287 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
LINC02488-201ENST00000504287 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms