RNA–Protein interactions for RNA: ENST00000503716.5

LRBA-203, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 1 (best)

Gene LRBA, Length 3,712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-203ENST00000503716 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
LRBA-203ENST00000503716 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
LRBA-203ENST00000503716 MYT1Q01538 1121 aa10.84□□□□□ -0.67
LRBA-203ENST00000503716 DCAF8L2P0C7V8 631 aa10.83□□□□□ -0.68
LRBA-203ENST00000503716 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
LRBA-203ENST00000503716 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
LRBA-203ENST00000503716 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
LRBA-203ENST00000503716 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
LRBA-203ENST00000503716 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
LRBA-203ENST00000503716 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
LRBA-203ENST00000503716 EHMT2Q96KQ7 1210 aa10.47□□□□□ -0.73
LRBA-203ENST00000503716 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
LRBA-203ENST00000503716 APLP2Q06481 763 aa10.37□□□□□ -0.75
LRBA-203ENST00000503716 PLPPR3Q6T4P5 718 aa10.21□□□□□ -0.77
LRBA-203ENST00000503716 PCGF6Q9BYE7 350 aa10.16□□□□□ -0.78
LRBA-203ENST00000503716 CCDC180Q9P1Z9 1646 aa10.15□□□□□ -0.78
LRBA-203ENST00000503716 FAM9AQ8IZU1 332 aaPredicted RBP10.11□□□□□ -0.79
LRBA-203ENST00000503716 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
LRBA-203ENST00000503716 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
LRBA-203ENST00000503716 ZCCHC6Q5VYS8 1495 aaKnown RBP10.04□□□□□ -0.8
LRBA-203ENST00000503716 LOC105371045A0A1W2PR82 267 aa10.04□□□□□ -0.8
LRBA-203ENST00000503716 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
LRBA-203ENST00000503716 ABCC9O60706 1549 aa10.02□□□□□ -0.8
LRBA-203ENST00000503716 EIF5BO60841 1220 aaKnown RBP10□□□□□ -0.81
LRBA-203ENST00000503716 CHIC1Q5VXU3 224 aa9.86□□□□□ -0.83
LRBA-203ENST00000503716 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
LRBA-203ENST00000503716 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
LRBA-203ENST00000503716 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
LRBA-203ENST00000503716 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
LRBA-203ENST00000503716 SCRIBQ14160 1630 aa9.74□□□□□ -0.85
LRBA-203ENST00000503716 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
LRBA-203ENST00000503716 MYO15BQ96JP2 1530 aa9.72□□□□□ -0.85
LRBA-203ENST00000503716 ARXQ96QS3 562 aa9.7□□□□□ -0.86
LRBA-203ENST00000503716 HRCP23327 699 aa9.7□□□□□ -0.86
LRBA-203ENST00000503716 DCAF1Q9Y4B6 1507 aa9.68□□□□□ -0.86
LRBA-203ENST00000503716 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
LRBA-203ENST00000503716 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
LRBA-203ENST00000503716 TRIM41Q8WV44 630 aa9.65□□□□□ -0.87
LRBA-203ENST00000503716 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
LRBA-203ENST00000503716 NACADO15069 1562 aa9.55□□□□□ -0.88
LRBA-203ENST00000503716 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
LRBA-203ENST00000503716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.53□□□□□ -0.88
LRBA-203ENST00000503716 RB1CC1Q8TDY2 1594 aa9.5□□□□□ -0.89
LRBA-203ENST00000503716 KCNA4P22459 653 aa9.5□□□□□ -0.89
LRBA-203ENST00000503716 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
LRBA-203ENST00000503716 YTHDC1Q96MU7 727 aaKnown RBP9.48□□□□□ -0.89
LRBA-203ENST00000503716 HOMEZQ8IX15 550 aa9.48□□□□□ -0.89
LRBA-203ENST00000503716 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.89
LRBA-203ENST00000503716 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
LRBA-203ENST00000503716 TRIM26Q12899 539 aaPredicted RBP9.43□□□□□ -0.9
LRBA-203ENST00000503716 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.9
LRBA-203ENST00000503716 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.91
LRBA-203ENST00000503716 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
LRBA-203ENST00000503716 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
LRBA-203ENST00000503716 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
LRBA-203ENST00000503716 HNRNPUL2Q1KMD3 747 aaKnown RBP9.34□□□□□ -0.91
LRBA-203ENST00000503716 WIZO95785 1651 aa9.3□□□□□ -0.92
LRBA-203ENST00000503716 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
LRBA-203ENST00000503716 ITGAEP38570 1179 aa9.28□□□□□ -0.92
LRBA-203ENST00000503716 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
LRBA-203ENST00000503716 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.93
LRBA-203ENST00000503716 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
LRBA-203ENST00000503716 PDIA4P13667 645 aaKnown RBP9.25□□□□□ -0.93
LRBA-203ENST00000503716 BAZ1AQ9NRL2 1556 aaPredicted RBP9.23□□□□□ -0.93
LRBA-203ENST00000503716 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
LRBA-203ENST00000503716 BICRAQ9NZM4 1560 aa9.21□□□□□ -0.93
LRBA-203ENST00000503716 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
LRBA-203ENST00000503716 SCAF1Q9H7N4 1312 aaKnown RBP9.2□□□□□ -0.94
LRBA-203ENST00000503716 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
LRBA-203ENST00000503716 SMARCA4P51532 1647 aa9.17□□□□□ -0.94
LRBA-203ENST00000503716 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
LRBA-203ENST00000503716 BCANQ96GW7 911 aa9.16□□□□□ -0.94
LRBA-203ENST00000503716 PDE4CQ08493 712 aa9.15□□□□□ -0.94
LRBA-203ENST00000503716 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
LRBA-203ENST00000503716 DIEXFQ68CQ4 756 aaKnown RBP9.14□□□□□ -0.95
LRBA-203ENST00000503716 PKNOX2Q96KN3 472 aa9.14□□□□□ -0.95
LRBA-203ENST00000503716 CCDC88BA6NC98 1476 aa9.13□□□□□ -0.95
LRBA-203ENST00000503716 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
LRBA-203ENST00000503716 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
LRBA-203ENST00000503716 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
LRBA-203ENST00000503716 ZEB1P37275 1124 aaPredicted RBP9.08□□□□□ -0.96
LRBA-203ENST00000503716 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
LRBA-203ENST00000503716 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
LRBA-203ENST00000503716 DHX37Q8IY37 1157 aaKnown RBP9.07□□□□□ -0.96
LRBA-203ENST00000503716 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
LRBA-203ENST00000503716 ATAD2BQ9ULI0 1458 aa9.07□□□□□ -0.96
LRBA-203ENST00000503716 NEFLP07196 543 aa9.07□□□□□ -0.96
LRBA-203ENST00000503716 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
LRBA-203ENST00000503716 ANO8Q9HCE9 1232 aaPredicted RBP9.06□□□□□ -0.96
LRBA-203ENST00000503716 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
LRBA-203ENST00000503716 P3H3Q8IVL6 736 aa9.02□□□□□ -0.97
LRBA-203ENST00000503716 HIRIP3Q9BW71 556 aaPredicted RBP9.01□□□□□ -0.97
LRBA-203ENST00000503716 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
LRBA-203ENST00000503716 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
LRBA-203ENST00000503716 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
LRBA-203ENST00000503716 SOGA1O94964 1423 aa8.97□□□□□ -0.97
LRBA-203ENST00000503716 MIER1Q8N108 512 aa8.96□□□□□ -0.97
LRBA-203ENST00000503716 ACIN1Q9UKV3 1341 aaKnown RBP8.96□□□□□ -0.98
LRBA-203ENST00000503716 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
LRBA-203ENST00000503716 WRNQ14191 1432 aaPredicted RBP eCLIP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms