RNA–Protein interactions for RNA: ENST00000503668.1

HULC-201, hepatocellular carcinoma up-regulated long non-coding RNA, humanhuman

TSL 1 (best) BASIC

Gene HULC, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HULC-201ENST00000503668 AEBP2Q6ZN18 517 aaPredicted RBP31.84■■■□□ 2.69
HULC-201ENST00000503668 CHIC1Q5VXU3 224 aa30.11■■■□□ 2.41
HULC-201ENST00000503668 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
HULC-201ENST00000503668 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
HULC-201ENST00000503668 FOXD1Q16676 465 aa25.29■■□□□ 1.64
HULC-201ENST00000503668 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
HULC-201ENST00000503668 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
HULC-201ENST00000503668 ADRA2BP18089 450 aa23.58■■□□□ 1.37
HULC-201ENST00000503668 PIAS4Q8N2W9 510 aaPredicted RBP23.53■■□□□ 1.36
HULC-201ENST00000503668 MSH5O43196 834 aa23.52■■□□□ 1.36
HULC-201ENST00000503668 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
HULC-201ENST00000503668 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
HULC-201ENST00000503668 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
HULC-201ENST00000503668 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
HULC-201ENST00000503668 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
HULC-201ENST00000503668 HOXD11P31277 338 aaPredicted RBP20.66■□□□□ 0.9
HULC-201ENST00000503668 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.89
HULC-201ENST00000503668 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
HULC-201ENST00000503668 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
HULC-201ENST00000503668 CACNB1Q02641 598 aaPredicted RBP20.25■□□□□ 0.83
HULC-201ENST00000503668 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
HULC-201ENST00000503668 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
HULC-201ENST00000503668 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
HULC-201ENST00000503668 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
HULC-201ENST00000503668 C1QBPQ07021 282 aaKnown RBP19.81■□□□□ 0.76
HULC-201ENST00000503668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
HULC-201ENST00000503668 KCNA4P22459 653 aa19.61■□□□□ 0.73
HULC-201ENST00000503668 U3KPZ7 1027 aaPredicted RBP19.29■□□□□ 0.68
HULC-201ENST00000503668 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
HULC-201ENST00000503668 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
HULC-201ENST00000503668 CAPN15O75808 1086 aa18.93■□□□□ 0.62
HULC-201ENST00000503668 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
HULC-201ENST00000503668 DSG3P32926 999 aa18.89■□□□□ 0.61
HULC-201ENST00000503668 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
HULC-201ENST00000503668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
HULC-201ENST00000503668 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
HULC-201ENST00000503668 ABCB7O75027 752 aa18.54■□□□□ 0.56
HULC-201ENST00000503668 APLP2Q06481 763 aa18.54■□□□□ 0.56
HULC-201ENST00000503668 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
HULC-201ENST00000503668 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
HULC-201ENST00000503668 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
HULC-201ENST00000503668 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
HULC-201ENST00000503668 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
HULC-201ENST00000503668 POLA2Q14181 598 aa18.18■□□□□ 0.5
HULC-201ENST00000503668 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
HULC-201ENST00000503668 POTEHQ6S545 545 aa18.09■□□□□ 0.49
HULC-201ENST00000503668 ZBTB22O15209 634 aa18.07■□□□□ 0.48
HULC-201ENST00000503668 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
HULC-201ENST00000503668 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
HULC-201ENST00000503668 ATXN8OSP0DMR3 200 aa17.63■□□□□ 0.41
HULC-201ENST00000503668 CHRDL2Q6WN34 429 aa17.59■□□□□ 0.41
HULC-201ENST00000503668 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
HULC-201ENST00000503668 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
HULC-201ENST00000503668 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
HULC-201ENST00000503668 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
HULC-201ENST00000503668 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
HULC-201ENST00000503668 FBLN2P98095 1184 aa17.23■□□□□ 0.35
HULC-201ENST00000503668 PIP4P2Q8N4L2 257 aa17.21■□□□□ 0.35
HULC-201ENST00000503668 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
HULC-201ENST00000503668 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
HULC-201ENST00000503668 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
HULC-201ENST00000503668 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
HULC-201ENST00000503668 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
HULC-201ENST00000503668 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
HULC-201ENST00000503668 SSUH2Q9Y2M2 353 aa16.98■□□□□ 0.31
HULC-201ENST00000503668 SP7Q8TDD2 431 aaPredicted RBP16.93■□□□□ 0.3
HULC-201ENST00000503668 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
HULC-201ENST00000503668 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
HULC-201ENST00000503668 HAX1O00165 279 aa16.87■□□□□ 0.29
HULC-201ENST00000503668 SPDYE1Q8NFV5 336 aaPredicted RBP16.86■□□□□ 0.29
HULC-201ENST00000503668 EVX2Q03828 476 aa16.81■□□□□ 0.28
HULC-201ENST00000503668 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
HULC-201ENST00000503668 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
HULC-201ENST00000503668 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
HULC-201ENST00000503668 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
HULC-201ENST00000503668 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
HULC-201ENST00000503668 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
HULC-201ENST00000503668 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
HULC-201ENST00000503668 GABBR2O75899 941 aa16.33■□□□□ 0.2
HULC-201ENST00000503668 CREBZFQ9NS37 354 aa16.24■□□□□ 0.19
HULC-201ENST00000503668 CD44P16070 742 aaKnown RBP16.21■□□□□ 0.19
HULC-201ENST00000503668 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
HULC-201ENST00000503668 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
HULC-201ENST00000503668 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
HULC-201ENST00000503668 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
HULC-201ENST00000503668 MNX1P50219 401 aaPredicted RBP16■□□□□ 0.15
HULC-201ENST00000503668 PROM2Q8N271 834 aa16■□□□□ 0.15
HULC-201ENST00000503668 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
HULC-201ENST00000503668 ZNF579Q8NAF0 562 aaKnown RBP15.96■□□□□ 0.15
HULC-201ENST00000503668 CLCN6P51797 869 aa15.91■□□□□ 0.14
HULC-201ENST00000503668 LHX8Q68G74 356 aa15.89■□□□□ 0.13
HULC-201ENST00000503668 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
HULC-201ENST00000503668 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
HULC-201ENST00000503668 PHF12Q96QT6 1004 aa15.81■□□□□ 0.12
HULC-201ENST00000503668 DCBLD2Q96PD2 775 aa15.8■□□□□ 0.12
HULC-201ENST00000503668 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
HULC-201ENST00000503668 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
HULC-201ENST00000503668 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
HULC-201ENST00000503668 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
HULC-201ENST00000503668 MIER1Q8N108 512 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1695.7 ms