RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
SCLT1-206ENST00000503565 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
SCLT1-206ENST00000503565 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
SCLT1-206ENST00000503565 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-206ENST00000503565 FOXD1Q16676 465 aa17.82■□□□□ 0.44
SCLT1-206ENST00000503565 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
SCLT1-206ENST00000503565 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
SCLT1-206ENST00000503565 ADRA2BP18089 450 aa17.04■□□□□ 0.32
SCLT1-206ENST00000503565 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
SCLT1-206ENST00000503565 MSH5O43196 834 aa16.34■□□□□ 0.21
SCLT1-206ENST00000503565 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
SCLT1-206ENST00000503565 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-206ENST00000503565 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SCLT1-206ENST00000503565 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
SCLT1-206ENST00000503565 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
SCLT1-206ENST00000503565 KCNA4P22459 653 aa15.14■□□□□ 0.01
SCLT1-206ENST00000503565 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
SCLT1-206ENST00000503565 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
SCLT1-206ENST00000503565 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
SCLT1-206ENST00000503565 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-206ENST00000503565 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-206ENST00000503565 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
SCLT1-206ENST00000503565 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
SCLT1-206ENST00000503565 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
SCLT1-206ENST00000503565 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
SCLT1-206ENST00000503565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCLT1-206ENST00000503565 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
SCLT1-206ENST00000503565 ZBTB22O15209 634 aa14□□□□□ -0.17
SCLT1-206ENST00000503565 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-206ENST00000503565 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
SCLT1-206ENST00000503565 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
SCLT1-206ENST00000503565 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
SCLT1-206ENST00000503565 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
SCLT1-206ENST00000503565 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-206ENST00000503565 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-206ENST00000503565 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
SCLT1-206ENST00000503565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-206ENST00000503565 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
SCLT1-206ENST00000503565 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-206ENST00000503565 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-206ENST00000503565 CAPN15O75808 1086 aa13.47□□□□□ -0.25
SCLT1-206ENST00000503565 APLP2Q06481 763 aa13.41□□□□□ -0.26
SCLT1-206ENST00000503565 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
SCLT1-206ENST00000503565 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-206ENST00000503565 DSG3P32926 999 aa13.37□□□□□ -0.27
SCLT1-206ENST00000503565 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-206ENST00000503565 ABCB7O75027 752 aa13.27□□□□□ -0.29
SCLT1-206ENST00000503565 POLA2Q14181 598 aa13.19□□□□□ -0.3
SCLT1-206ENST00000503565 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-206ENST00000503565 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
SCLT1-206ENST00000503565 FBLN2P98095 1184 aa12.76□□□□□ -0.37
SCLT1-206ENST00000503565 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
SCLT1-206ENST00000503565 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
SCLT1-206ENST00000503565 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
SCLT1-206ENST00000503565 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
SCLT1-206ENST00000503565 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
SCLT1-206ENST00000503565 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
SCLT1-206ENST00000503565 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
SCLT1-206ENST00000503565 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
SCLT1-206ENST00000503565 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
SCLT1-206ENST00000503565 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-206ENST00000503565 FKBP8Q14318 412 aa12.37□□□□□ -0.43
SCLT1-206ENST00000503565 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCLT1-206ENST00000503565 PROM2Q8N271 834 aa12.33□□□□□ -0.44
SCLT1-206ENST00000503565 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
SCLT1-206ENST00000503565 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
SCLT1-206ENST00000503565 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-206ENST00000503565 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
SCLT1-206ENST00000503565 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
SCLT1-206ENST00000503565 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCLT1-206ENST00000503565 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
SCLT1-206ENST00000503565 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
SCLT1-206ENST00000503565 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
SCLT1-206ENST00000503565 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-206ENST00000503565 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
SCLT1-206ENST00000503565 POTEHQ6S545 545 aa11.97□□□□□ -0.49
SCLT1-206ENST00000503565 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
SCLT1-206ENST00000503565 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
SCLT1-206ENST00000503565 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
SCLT1-206ENST00000503565 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
SCLT1-206ENST00000503565 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-206ENST00000503565 MIER1Q8N108 512 aa11.8□□□□□ -0.52
SCLT1-206ENST00000503565 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
SCLT1-206ENST00000503565 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
SCLT1-206ENST00000503565 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
SCLT1-206ENST00000503565 EVX2Q03828 476 aa11.71□□□□□ -0.53
SCLT1-206ENST00000503565 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-206ENST00000503565 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
SCLT1-206ENST00000503565 HAX1O00165 279 aa11.64□□□□□ -0.55
SCLT1-206ENST00000503565 NUBP1P53384 320 aa11.61□□□□□ -0.55
SCLT1-206ENST00000503565 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
SCLT1-206ENST00000503565 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCLT1-206ENST00000503565 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
SCLT1-206ENST00000503565 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
SCLT1-206ENST00000503565 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
SCLT1-206ENST00000503565 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-206ENST00000503565 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
SCLT1-206ENST00000503565 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
SCLT1-206ENST00000503565 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-206ENST00000503565 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms