RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
AC109349.1-201ENST00000503299 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
AC109349.1-201ENST00000503299 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
AC109349.1-201ENST00000503299 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
AC109349.1-201ENST00000503299 FOXD1Q16676 465 aa26.86■■□□□ 1.89
AC109349.1-201ENST00000503299 POTEDQ86YR6 584 aa25.93■■□□□ 1.74
AC109349.1-201ENST00000503299 MSH5O43196 834 aa25.42■■□□□ 1.66
AC109349.1-201ENST00000503299 PIAS4Q8N2W9 510 aaPredicted RBP24.92■■□□□ 1.58
AC109349.1-201ENST00000503299 PLPPR3Q6T4P5 718 aa24.65■■□□□ 1.54
AC109349.1-201ENST00000503299 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
AC109349.1-201ENST00000503299 ADRA2BP18089 450 aa24.48■■□□□ 1.51
AC109349.1-201ENST00000503299 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
AC109349.1-201ENST00000503299 MAPK8IP2Q13387 824 aaPredicted RBP22.68■■□□□ 1.22
AC109349.1-201ENST00000503299 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
AC109349.1-201ENST00000503299 CACNB1Q02641 598 aaPredicted RBP22.21■■□□□ 1.15
AC109349.1-201ENST00000503299 DCAF8L1A6NGE4 600 aa21.77■■□□□ 1.08
AC109349.1-201ENST00000503299 RNF39Q9H2S5 420 aa21.61■■□□□ 1.05
AC109349.1-201ENST00000503299 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
AC109349.1-201ENST00000503299 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
AC109349.1-201ENST00000503299 C1QBPQ07021 282 aaKnown RBP21.28■■□□□ 1
AC109349.1-201ENST00000503299 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
AC109349.1-201ENST00000503299 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
AC109349.1-201ENST00000503299 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
AC109349.1-201ENST00000503299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.88
AC109349.1-201ENST00000503299 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
AC109349.1-201ENST00000503299 POTEHQ6S545 545 aa20.19■□□□□ 0.82
AC109349.1-201ENST00000503299 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
AC109349.1-201ENST00000503299 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
AC109349.1-201ENST00000503299 DSG3P32926 999 aa20.02■□□□□ 0.8
AC109349.1-201ENST00000503299 CAPN15O75808 1086 aa19.96■□□□□ 0.79
AC109349.1-201ENST00000503299 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
AC109349.1-201ENST00000503299 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
AC109349.1-201ENST00000503299 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
AC109349.1-201ENST00000503299 APLP2Q06481 763 aa19.45■□□□□ 0.7
AC109349.1-201ENST00000503299 ZNF219Q9P2Y4 722 aaPredicted RBP19.44■□□□□ 0.7
AC109349.1-201ENST00000503299 ABCB7O75027 752 aa19.41■□□□□ 0.7
AC109349.1-201ENST00000503299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
AC109349.1-201ENST00000503299 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
AC109349.1-201ENST00000503299 KCNA4P22459 653 aa19.18■□□□□ 0.66
AC109349.1-201ENST00000503299 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
AC109349.1-201ENST00000503299 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
AC109349.1-201ENST00000503299 CHRDL2Q6WN34 429 aa18.96■□□□□ 0.63
AC109349.1-201ENST00000503299 POLA2Q14181 598 aa18.82■□□□□ 0.6
AC109349.1-201ENST00000503299 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
AC109349.1-201ENST00000503299 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
AC109349.1-201ENST00000503299 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
AC109349.1-201ENST00000503299 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
AC109349.1-201ENST00000503299 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
AC109349.1-201ENST00000503299 PIP4P2Q8N4L2 257 aa18.36■□□□□ 0.53
AC109349.1-201ENST00000503299 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
AC109349.1-201ENST00000503299 HAX1O00165 279 aa18.23■□□□□ 0.51
AC109349.1-201ENST00000503299 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
AC109349.1-201ENST00000503299 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
AC109349.1-201ENST00000503299 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
AC109349.1-201ENST00000503299 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
AC109349.1-201ENST00000503299 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
AC109349.1-201ENST00000503299 EVX2Q03828 476 aa17.93■□□□□ 0.46
AC109349.1-201ENST00000503299 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
AC109349.1-201ENST00000503299 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
AC109349.1-201ENST00000503299 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
AC109349.1-201ENST00000503299 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
AC109349.1-201ENST00000503299 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
AC109349.1-201ENST00000503299 FBLN2P98095 1184 aa17.65■□□□□ 0.42
AC109349.1-201ENST00000503299 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
AC109349.1-201ENST00000503299 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
AC109349.1-201ENST00000503299 C19orf67A6NJJ6 358 aa17.6■□□□□ 0.41
AC109349.1-201ENST00000503299 ZBTB22O15209 634 aa17.6■□□□□ 0.41
AC109349.1-201ENST00000503299 GABBR2O75899 941 aa17.51■□□□□ 0.39
AC109349.1-201ENST00000503299 LHX8Q68G74 356 aa17.46■□□□□ 0.39
AC109349.1-201ENST00000503299 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
AC109349.1-201ENST00000503299 SSUH2Q9Y2M2 353 aa17.44■□□□□ 0.38
AC109349.1-201ENST00000503299 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
AC109349.1-201ENST00000503299 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
AC109349.1-201ENST00000503299 PRR29P0C7W0 189 aa17.24■□□□□ 0.35
AC109349.1-201ENST00000503299 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
AC109349.1-201ENST00000503299 POTEIP0CG38 1075 aa17.12■□□□□ 0.33
AC109349.1-201ENST00000503299 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
AC109349.1-201ENST00000503299 CLCN6P51797 869 aa17.04■□□□□ 0.32
AC109349.1-201ENST00000503299 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
AC109349.1-201ENST00000503299 DCBLD2Q96PD2 775 aa16.9■□□□□ 0.3
AC109349.1-201ENST00000503299 PLSCR2Q9NRY7 297 aa16.87■□□□□ 0.29
AC109349.1-201ENST00000503299 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
AC109349.1-201ENST00000503299 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
AC109349.1-201ENST00000503299 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
AC109349.1-201ENST00000503299 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
AC109349.1-201ENST00000503299 OTUD5Q96G74 571 aa16.62■□□□□ 0.25
AC109349.1-201ENST00000503299 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
AC109349.1-201ENST00000503299 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
AC109349.1-201ENST00000503299 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
AC109349.1-201ENST00000503299 POTEMA6NI47 508 aa16.46■□□□□ 0.23
AC109349.1-201ENST00000503299 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
AC109349.1-201ENST00000503299 POTEGQ6S5H5 508 aa16.39■□□□□ 0.21
AC109349.1-201ENST00000503299 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
AC109349.1-201ENST00000503299 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC109349.1-201ENST00000503299 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
AC109349.1-201ENST00000503299 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
AC109349.1-201ENST00000503299 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
AC109349.1-201ENST00000503299 ASTLQ6HA08 431 aaPredicted RBP16.26■□□□□ 0.19
AC109349.1-201ENST00000503299 METRNQ9UJH8 293 aa16.25■□□□□ 0.19
AC109349.1-201ENST00000503299 C7P10643 843 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms