RNA–Protein interactions for RNA: ENST00000502944.1

MATR3-204, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 362 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-204ENST00000502944 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
MATR3-204ENST00000502944 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
MATR3-204ENST00000502944 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
MATR3-204ENST00000502944 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
MATR3-204ENST00000502944 FOXD1Q16676 465 aa18.29■□□□□ 0.52
MATR3-204ENST00000502944 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
MATR3-204ENST00000502944 ADRA2BP18089 450 aa17.51■□□□□ 0.39
MATR3-204ENST00000502944 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
MATR3-204ENST00000502944 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
MATR3-204ENST00000502944 MSH5O43196 834 aa16.93■□□□□ 0.3
MATR3-204ENST00000502944 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
MATR3-204ENST00000502944 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
MATR3-204ENST00000502944 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
MATR3-204ENST00000502944 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
MATR3-204ENST00000502944 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
MATR3-204ENST00000502944 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
MATR3-204ENST00000502944 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
MATR3-204ENST00000502944 KCNA4P22459 653 aa15.49■□□□□ 0.07
MATR3-204ENST00000502944 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
MATR3-204ENST00000502944 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
MATR3-204ENST00000502944 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
MATR3-204ENST00000502944 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
MATR3-204ENST00000502944 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
MATR3-204ENST00000502944 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
MATR3-204ENST00000502944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■■■□□ 16.8
MATR3-204ENST00000502944 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
MATR3-204ENST00000502944 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
MATR3-204ENST00000502944 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
MATR3-204ENST00000502944 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
MATR3-204ENST00000502944 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
MATR3-204ENST00000502944 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
MATR3-204ENST00000502944 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
MATR3-204ENST00000502944 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
MATR3-204ENST00000502944 ZBTB22O15209 634 aa14.2□□□□□ -0.14
MATR3-204ENST00000502944 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
MATR3-204ENST00000502944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
MATR3-204ENST00000502944 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
MATR3-204ENST00000502944 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
MATR3-204ENST00000502944 CAPN15O75808 1086 aa14.04□□□□□ -0.16
MATR3-204ENST00000502944 APLP2Q06481 763 aa14.04□□□□□ -0.16
MATR3-204ENST00000502944 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
MATR3-204ENST00000502944 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
MATR3-204ENST00000502944 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
MATR3-204ENST00000502944 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
MATR3-204ENST00000502944 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
MATR3-204ENST00000502944 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
MATR3-204ENST00000502944 ABCB7O75027 752 aa13.75□□□□□ -0.21
MATR3-204ENST00000502944 DSG3P32926 999 aa13.73□□□□□ -0.21
MATR3-204ENST00000502944 POLA2Q14181 598 aa13.64□□□□□ -0.23
MATR3-204ENST00000502944 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
MATR3-204ENST00000502944 FBLN2P98095 1184 aa13.29□□□□□ -0.28
MATR3-204ENST00000502944 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
MATR3-204ENST00000502944 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
MATR3-204ENST00000502944 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
MATR3-204ENST00000502944 POTEHQ6S545 545 aa13□□□□□ -0.33
MATR3-204ENST00000502944 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
MATR3-204ENST00000502944 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
MATR3-204ENST00000502944 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
MATR3-204ENST00000502944 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
MATR3-204ENST00000502944 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
MATR3-204ENST00000502944 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
MATR3-204ENST00000502944 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
MATR3-204ENST00000502944 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
MATR3-204ENST00000502944 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
MATR3-204ENST00000502944 FKBP8Q14318 412 aa12.77□□□□□ -0.37
MATR3-204ENST00000502944 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
MATR3-204ENST00000502944 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
MATR3-204ENST00000502944 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
MATR3-204ENST00000502944 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
MATR3-204ENST00000502944 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
MATR3-204ENST00000502944 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
MATR3-204ENST00000502944 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
MATR3-204ENST00000502944 PROM2Q8N271 834 aa12.48□□□□□ -0.41
MATR3-204ENST00000502944 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
MATR3-204ENST00000502944 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■□□□ 11.7
MATR3-204ENST00000502944 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
MATR3-204ENST00000502944 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
MATR3-204ENST00000502944 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
MATR3-204ENST00000502944 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
MATR3-204ENST00000502944 MIER1Q8N108 512 aa12.29□□□□□ -0.44
MATR3-204ENST00000502944 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
MATR3-204ENST00000502944 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
MATR3-204ENST00000502944 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
MATR3-204ENST00000502944 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
MATR3-204ENST00000502944 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
MATR3-204ENST00000502944 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
MATR3-204ENST00000502944 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
MATR3-204ENST00000502944 HAX1O00165 279 aa12.17□□□□□ -0.46
MATR3-204ENST00000502944 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
MATR3-204ENST00000502944 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
MATR3-204ENST00000502944 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
MATR3-204ENST00000502944 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
MATR3-204ENST00000502944 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
MATR3-204ENST00000502944 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
MATR3-204ENST00000502944 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
MATR3-204ENST00000502944 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
MATR3-204ENST00000502944 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
MATR3-204ENST00000502944 EVX2Q03828 476 aa11.97□□□□□ -0.49
MATR3-204ENST00000502944 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
MATR3-204ENST00000502944 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms