RNA–Protein interactions for RNA: ENST00000502830.1

SEC24D-204, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-204ENST00000502830 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
SEC24D-204ENST00000502830 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
SEC24D-204ENST00000502830 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
SEC24D-204ENST00000502830 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
SEC24D-204ENST00000502830 FOXD1Q16676 465 aa16.37■□□□□ 0.21
SEC24D-204ENST00000502830 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
SEC24D-204ENST00000502830 MSH5O43196 834 aa15.36■□□□□ 0.05
SEC24D-204ENST00000502830 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
SEC24D-204ENST00000502830 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
SEC24D-204ENST00000502830 ADRA2BP18089 450 aa15.19■□□□□ 0.02
SEC24D-204ENST00000502830 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
SEC24D-204ENST00000502830 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
SEC24D-204ENST00000502830 KCNA4P22459 653 aa13.92□□□□□ -0.18
SEC24D-204ENST00000502830 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
SEC24D-204ENST00000502830 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
SEC24D-204ENST00000502830 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
SEC24D-204ENST00000502830 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
SEC24D-204ENST00000502830 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
SEC24D-204ENST00000502830 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
SEC24D-204ENST00000502830 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
SEC24D-204ENST00000502830 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
SEC24D-204ENST00000502830 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
SEC24D-204ENST00000502830 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
SEC24D-204ENST00000502830 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
SEC24D-204ENST00000502830 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-204ENST00000502830 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
SEC24D-204ENST00000502830 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
SEC24D-204ENST00000502830 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
SEC24D-204ENST00000502830 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
SEC24D-204ENST00000502830 ZBTB22O15209 634 aa12.82□□□□□ -0.36
SEC24D-204ENST00000502830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
SEC24D-204ENST00000502830 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
SEC24D-204ENST00000502830 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
SEC24D-204ENST00000502830 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
SEC24D-204ENST00000502830 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
SEC24D-204ENST00000502830 CAPN15O75808 1086 aa12.29□□□□□ -0.44
SEC24D-204ENST00000502830 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
SEC24D-204ENST00000502830 DSG3P32926 999 aa12.24□□□□□ -0.45
SEC24D-204ENST00000502830 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
SEC24D-204ENST00000502830 APLP2Q06481 763 aa12.11□□□□□ -0.47
SEC24D-204ENST00000502830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
SEC24D-204ENST00000502830 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
SEC24D-204ENST00000502830 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
SEC24D-204ENST00000502830 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
SEC24D-204ENST00000502830 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
SEC24D-204ENST00000502830 ABCB7O75027 752 aa12□□□□□ -0.49
SEC24D-204ENST00000502830 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
SEC24D-204ENST00000502830 FKBP8Q14318 412 aa11.84□□□□□ -0.51
SEC24D-204ENST00000502830 POTEHQ6S545 545 aa11.84□□□□□ -0.51
SEC24D-204ENST00000502830 POLA2Q14181 598 aa11.71□□□□□ -0.53
SEC24D-204ENST00000502830 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
SEC24D-204ENST00000502830 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
SEC24D-204ENST00000502830 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
SEC24D-204ENST00000502830 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
SEC24D-204ENST00000502830 CHRDL2Q6WN34 429 aa11.46□□□□□ -0.57
SEC24D-204ENST00000502830 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
SEC24D-204ENST00000502830 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
SEC24D-204ENST00000502830 FBLN2P98095 1184 aa11.39□□□□□ -0.59
SEC24D-204ENST00000502830 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
SEC24D-204ENST00000502830 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
SEC24D-204ENST00000502830 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
SEC24D-204ENST00000502830 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
SEC24D-204ENST00000502830 PROM2Q8N271 834 aa11.28□□□□□ -0.6
SEC24D-204ENST00000502830 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
SEC24D-204ENST00000502830 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
SEC24D-204ENST00000502830 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
SEC24D-204ENST00000502830 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
SEC24D-204ENST00000502830 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
SEC24D-204ENST00000502830 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
SEC24D-204ENST00000502830 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
SEC24D-204ENST00000502830 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC24D-204ENST00000502830 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
SEC24D-204ENST00000502830 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
SEC24D-204ENST00000502830 ZNF692Q9BU19 519 aaPredicted RBP11.01□□□□□ -0.65
SEC24D-204ENST00000502830 HAX1O00165 279 aa10.98□□□□□ -0.65
SEC24D-204ENST00000502830 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
SEC24D-204ENST00000502830 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
SEC24D-204ENST00000502830 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
SEC24D-204ENST00000502830 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
SEC24D-204ENST00000502830 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
SEC24D-204ENST00000502830 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEC24D-204ENST00000502830 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
SEC24D-204ENST00000502830 EVX2Q03828 476 aa10.83□□□□□ -0.68
SEC24D-204ENST00000502830 PKD2Q13563 968 aa10.83□□□□□ -0.68
SEC24D-204ENST00000502830 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
SEC24D-204ENST00000502830 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
SEC24D-204ENST00000502830 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
SEC24D-204ENST00000502830 MIER1Q8N108 512 aa10.76□□□□□ -0.69
SEC24D-204ENST00000502830 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
SEC24D-204ENST00000502830 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
SEC24D-204ENST00000502830 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
SEC24D-204ENST00000502830 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
SEC24D-204ENST00000502830 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
SEC24D-204ENST00000502830 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
SEC24D-204ENST00000502830 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
SEC24D-204ENST00000502830 GABBR2O75899 941 aa10.59□□□□□ -0.71
SEC24D-204ENST00000502830 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
SEC24D-204ENST00000502830 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-204ENST00000502830 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-204ENST00000502830 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms