RNA–Protein interactions for RNA: ENST00000502780.2

TRAV31-201, Transcript of T cell receptor alpha variable 31 (pseudogene), humanhuman

BASIC

Gene TRAV31, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV31-201ENST00000502780 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
TRAV31-201ENST00000502780 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
TRAV31-201ENST00000502780 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
TRAV31-201ENST00000502780 SENP3Q9H4L4 574 aaPredicted RBP25.31■■□□□ 1.64
TRAV31-201ENST00000502780 FOXD1Q16676 465 aa23.6■■□□□ 1.37
TRAV31-201ENST00000502780 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
TRAV31-201ENST00000502780 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
TRAV31-201ENST00000502780 ADRA2BP18089 450 aa22.62■■□□□ 1.21
TRAV31-201ENST00000502780 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
TRAV31-201ENST00000502780 MSH5O43196 834 aa21.71■■□□□ 1.07
TRAV31-201ENST00000502780 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
TRAV31-201ENST00000502780 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
TRAV31-201ENST00000502780 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
TRAV31-201ENST00000502780 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
TRAV31-201ENST00000502780 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
TRAV31-201ENST00000502780 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.81
TRAV31-201ENST00000502780 KCNA4P22459 653 aa20.05■□□□□ 0.8
TRAV31-201ENST00000502780 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
TRAV31-201ENST00000502780 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
TRAV31-201ENST00000502780 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
TRAV31-201ENST00000502780 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
TRAV31-201ENST00000502780 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
TRAV31-201ENST00000502780 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
TRAV31-201ENST00000502780 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
TRAV31-201ENST00000502780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAV31-201ENST00000502780 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
TRAV31-201ENST00000502780 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
TRAV31-201ENST00000502780 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
TRAV31-201ENST00000502780 ZBTB22O15209 634 aa18.46■□□□□ 0.55
TRAV31-201ENST00000502780 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
TRAV31-201ENST00000502780 C1QBPQ07021 282 aaKnown RBP18.37■□□□□ 0.53
TRAV31-201ENST00000502780 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
TRAV31-201ENST00000502780 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
TRAV31-201ENST00000502780 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
TRAV31-201ENST00000502780 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
TRAV31-201ENST00000502780 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
TRAV31-201ENST00000502780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
TRAV31-201ENST00000502780 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
TRAV31-201ENST00000502780 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
TRAV31-201ENST00000502780 CAPN15O75808 1086 aa18■□□□□ 0.47
TRAV31-201ENST00000502780 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
TRAV31-201ENST00000502780 APLP2Q06481 763 aa17.91■□□□□ 0.46
TRAV31-201ENST00000502780 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
TRAV31-201ENST00000502780 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
TRAV31-201ENST00000502780 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
TRAV31-201ENST00000502780 DSG3P32926 999 aa17.71■□□□□ 0.43
TRAV31-201ENST00000502780 ABCB7O75027 752 aa17.7■□□□□ 0.42
TRAV31-201ENST00000502780 POLA2Q14181 598 aa17.55■□□□□ 0.4
TRAV31-201ENST00000502780 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
TRAV31-201ENST00000502780 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
TRAV31-201ENST00000502780 FBLN2P98095 1184 aa17.03■□□□□ 0.32
TRAV31-201ENST00000502780 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
TRAV31-201ENST00000502780 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
TRAV31-201ENST00000502780 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
TRAV31-201ENST00000502780 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
TRAV31-201ENST00000502780 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
TRAV31-201ENST00000502780 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
TRAV31-201ENST00000502780 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
TRAV31-201ENST00000502780 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
TRAV31-201ENST00000502780 SSUH2Q9Y2M2 353 aa16.53■□□□□ 0.24
TRAV31-201ENST00000502780 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
TRAV31-201ENST00000502780 FKBP8Q14318 412 aa16.46■□□□□ 0.23
TRAV31-201ENST00000502780 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAV31-201ENST00000502780 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
TRAV31-201ENST00000502780 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
TRAV31-201ENST00000502780 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
TRAV31-201ENST00000502780 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
TRAV31-201ENST00000502780 PROM2Q8N271 834 aa16.19■□□□□ 0.18
TRAV31-201ENST00000502780 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
TRAV31-201ENST00000502780 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
TRAV31-201ENST00000502780 PIP4P2Q8N4L2 257 aa16.02■□□□□ 0.16
TRAV31-201ENST00000502780 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRAV31-201ENST00000502780 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
TRAV31-201ENST00000502780 POTEHQ6S545 545 aa15.93■□□□□ 0.14
TRAV31-201ENST00000502780 PRKAR2AP13861 404 aaKnown RBP15.9■□□□□ 0.14
TRAV31-201ENST00000502780 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
TRAV31-201ENST00000502780 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
TRAV31-201ENST00000502780 MIER1Q8N108 512 aa15.77■□□□□ 0.12
TRAV31-201ENST00000502780 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
TRAV31-201ENST00000502780 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
TRAV31-201ENST00000502780 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
TRAV31-201ENST00000502780 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
TRAV31-201ENST00000502780 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
TRAV31-201ENST00000502780 HAX1O00165 279 aa15.58■□□□□ 0.08
TRAV31-201ENST00000502780 EVX2Q03828 476 aa15.5■□□□□ 0.07
TRAV31-201ENST00000502780 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRAV31-201ENST00000502780 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
TRAV31-201ENST00000502780 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
TRAV31-201ENST00000502780 C19orf67A6NJJ6 358 aa15.46■□□□□ 0.07
TRAV31-201ENST00000502780 CD44P16070 742 aaKnown RBP15.42■□□□□ 0.06
TRAV31-201ENST00000502780 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
TRAV31-201ENST00000502780 NUBP1P53384 320 aa15.35■□□□□ 0.05
TRAV31-201ENST00000502780 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
TRAV31-201ENST00000502780 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
TRAV31-201ENST00000502780 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
TRAV31-201ENST00000502780 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
TRAV31-201ENST00000502780 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
TRAV31-201ENST00000502780 DCAF8Q5TAQ9 597 aa15.23■□□□□ 0.03
TRAV31-201ENST00000502780 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
TRAV31-201ENST00000502780 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms