RNA–Protein interactions for RNA: ENST00000502546.2

NUP58P1-201, Transcript of nucleoporin 58 pseudogene 1, humanhuman

BASIC

Gene NUP58P1, Length 1,738 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58P1-201ENST00000502546 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
NUP58P1-201ENST00000502546 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
NUP58P1-201ENST00000502546 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
NUP58P1-201ENST00000502546 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
NUP58P1-201ENST00000502546 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
NUP58P1-201ENST00000502546 FOXD1Q16676 465 aa17.3■□□□□ 0.36
NUP58P1-201ENST00000502546 MSH5O43196 834 aa16.89■□□□□ 0.29
NUP58P1-201ENST00000502546 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
NUP58P1-201ENST00000502546 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
NUP58P1-201ENST00000502546 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
NUP58P1-201ENST00000502546 ADRA2BP18089 450 aa15.06■□□□□ 0
NUP58P1-201ENST00000502546 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
NUP58P1-201ENST00000502546 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
NUP58P1-201ENST00000502546 POTEHQ6S545 545 aa14.22□□□□□ -0.13
NUP58P1-201ENST00000502546 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
NUP58P1-201ENST00000502546 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
NUP58P1-201ENST00000502546 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
NUP58P1-201ENST00000502546 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
NUP58P1-201ENST00000502546 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
NUP58P1-201ENST00000502546 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
NUP58P1-201ENST00000502546 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
NUP58P1-201ENST00000502546 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
NUP58P1-201ENST00000502546 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
NUP58P1-201ENST00000502546 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
NUP58P1-201ENST00000502546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
NUP58P1-201ENST00000502546 DSG3P32926 999 aa12.82□□□□□ -0.36
NUP58P1-201ENST00000502546 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.36
NUP58P1-201ENST00000502546 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
NUP58P1-201ENST00000502546 CAPN15O75808 1086 aa12.68□□□□□ -0.38
NUP58P1-201ENST00000502546 KCNA4P22459 653 aa12.68□□□□□ -0.38
NUP58P1-201ENST00000502546 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
NUP58P1-201ENST00000502546 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
NUP58P1-201ENST00000502546 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
NUP58P1-201ENST00000502546 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
NUP58P1-201ENST00000502546 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
NUP58P1-201ENST00000502546 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
NUP58P1-201ENST00000502546 APLP2Q06481 763 aa12.25□□□□□ -0.45
NUP58P1-201ENST00000502546 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
NUP58P1-201ENST00000502546 ABCB7O75027 752 aa12.17□□□□□ -0.46
NUP58P1-201ENST00000502546 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
NUP58P1-201ENST00000502546 HAX1O00165 279 aa12.14□□□□□ -0.47
NUP58P1-201ENST00000502546 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
NUP58P1-201ENST00000502546 LHX8Q68G74 356 aa11.97□□□□□ -0.49
NUP58P1-201ENST00000502546 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
NUP58P1-201ENST00000502546 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
NUP58P1-201ENST00000502546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
NUP58P1-201ENST00000502546 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
NUP58P1-201ENST00000502546 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
NUP58P1-201ENST00000502546 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
NUP58P1-201ENST00000502546 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP58P1-201ENST00000502546 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
NUP58P1-201ENST00000502546 EVX2Q03828 476 aa11.66□□□□□ -0.54
NUP58P1-201ENST00000502546 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
NUP58P1-201ENST00000502546 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
NUP58P1-201ENST00000502546 ZBTB22O15209 634 aa11.61□□□□□ -0.55
NUP58P1-201ENST00000502546 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
NUP58P1-201ENST00000502546 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.56
NUP58P1-201ENST00000502546 POLA2Q14181 598 aa11.52□□□□□ -0.56
NUP58P1-201ENST00000502546 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
NUP58P1-201ENST00000502546 GABBR2O75899 941 aa11.49□□□□□ -0.57
NUP58P1-201ENST00000502546 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
NUP58P1-201ENST00000502546 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
NUP58P1-201ENST00000502546 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
NUP58P1-201ENST00000502546 POTEMA6NI47 508 aa11.32□□□□□ -0.6
NUP58P1-201ENST00000502546 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
NUP58P1-201ENST00000502546 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
NUP58P1-201ENST00000502546 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
NUP58P1-201ENST00000502546 CLCN6P51797 869 aa11.18□□□□□ -0.62
NUP58P1-201ENST00000502546 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
NUP58P1-201ENST00000502546 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
NUP58P1-201ENST00000502546 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
NUP58P1-201ENST00000502546 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
NUP58P1-201ENST00000502546 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
NUP58P1-201ENST00000502546 OTUD5Q96G74 571 aa11□□□□□ -0.65
NUP58P1-201ENST00000502546 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
NUP58P1-201ENST00000502546 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
NUP58P1-201ENST00000502546 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
NUP58P1-201ENST00000502546 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
NUP58P1-201ENST00000502546 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
NUP58P1-201ENST00000502546 FBLN2P98095 1184 aa10.81□□□□□ -0.68
NUP58P1-201ENST00000502546 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
NUP58P1-201ENST00000502546 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
NUP58P1-201ENST00000502546 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
NUP58P1-201ENST00000502546 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
NUP58P1-201ENST00000502546 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
NUP58P1-201ENST00000502546 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
NUP58P1-201ENST00000502546 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
NUP58P1-201ENST00000502546 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
NUP58P1-201ENST00000502546 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
NUP58P1-201ENST00000502546 LCE2DQ5TA82 110 aaPredicted RBP10.55□□□□□ -0.72
NUP58P1-201ENST00000502546 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
NUP58P1-201ENST00000502546 FKBP8Q14318 412 aa10.53□□□□□ -0.72
NUP58P1-201ENST00000502546 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
NUP58P1-201ENST00000502546 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
NUP58P1-201ENST00000502546 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
NUP58P1-201ENST00000502546 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
NUP58P1-201ENST00000502546 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
NUP58P1-201ENST00000502546 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
NUP58P1-201ENST00000502546 C7P10643 843 aa10.41□□□□□ -0.74
NUP58P1-201ENST00000502546 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms