RNA–Protein interactions for RNA: ENST00000502426.5

ABCC3-203, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 5,326 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-203ENST00000502426 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
ABCC3-203ENST00000502426 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
ABCC3-203ENST00000502426 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
ABCC3-203ENST00000502426 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
ABCC3-203ENST00000502426 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
ABCC3-203ENST00000502426 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
ABCC3-203ENST00000502426 APLP2Q06481 763 aa19.38■□□□□ 0.69
ABCC3-203ENST00000502426 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
ABCC3-203ENST00000502426 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
ABCC3-203ENST00000502426 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
ABCC3-203ENST00000502426 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
ABCC3-203ENST00000502426 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
ABCC3-203ENST00000502426 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
ABCC3-203ENST00000502426 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
ABCC3-203ENST00000502426 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
ABCC3-203ENST00000502426 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
ABCC3-203ENST00000502426 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
ABCC3-203ENST00000502426 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
ABCC3-203ENST00000502426 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
ABCC3-203ENST00000502426 NEFLP07196 543 aa18.42■□□□□ 0.54
ABCC3-203ENST00000502426 HRCP23327 699 aa18.36■□□□□ 0.53
ABCC3-203ENST00000502426 MYT1Q01538 1121 aa18.36■□□□□ 0.53
ABCC3-203ENST00000502426 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
ABCC3-203ENST00000502426 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
ABCC3-203ENST00000502426 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
ABCC3-203ENST00000502426 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
ABCC3-203ENST00000502426 ITGAEP38570 1179 aa17.98■□□□□ 0.47
ABCC3-203ENST00000502426 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
ABCC3-203ENST00000502426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
ABCC3-203ENST00000502426 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
ABCC3-203ENST00000502426 DAXXQ9UER7 740 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-203ENST00000502426 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
ABCC3-203ENST00000502426 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
ABCC3-203ENST00000502426 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.41
ABCC3-203ENST00000502426 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
ABCC3-203ENST00000502426 ABCC9O60706 1549 aa17.5■□□□□ 0.39
ABCC3-203ENST00000502426 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
ABCC3-203ENST00000502426 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
ABCC3-203ENST00000502426 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.384e-8■■■■■ 30
ABCC3-203ENST00000502426 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
ABCC3-203ENST00000502426 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
ABCC3-203ENST00000502426 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
ABCC3-203ENST00000502426 ANP32CO43423 234 aa17.41■□□□□ 0.38
ABCC3-203ENST00000502426 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
ABCC3-203ENST00000502426 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
ABCC3-203ENST00000502426 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
ABCC3-203ENST00000502426 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.36
ABCC3-203ENST00000502426 BCANQ96GW7 911 aa17.26■□□□□ 0.35
ABCC3-203ENST00000502426 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
ABCC3-203ENST00000502426 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
ABCC3-203ENST00000502426 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
ABCC3-203ENST00000502426 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
ABCC3-203ENST00000502426 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
ABCC3-203ENST00000502426 P3H3Q8IVL6 736 aa17.08■□□□□ 0.33
ABCC3-203ENST00000502426 FBLN2P98095 1184 aa17.06■□□□□ 0.32
ABCC3-203ENST00000502426 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
ABCC3-203ENST00000502426 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
ABCC3-203ENST00000502426 SCRIBQ14160 1630 aa17■□□□□ 0.31
ABCC3-203ENST00000502426 TONSLQ96HA7 1378 aa17■□□□□ 0.31
ABCC3-203ENST00000502426 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
ABCC3-203ENST00000502426 NEFMP07197 916 aa16.96■□□□□ 0.31
ABCC3-203ENST00000502426 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
ABCC3-203ENST00000502426 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
ABCC3-203ENST00000502426 FKBP8Q14318 412 aa16.89■□□□□ 0.29
ABCC3-203ENST00000502426 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.296e-7■■■□□ 18.3
ABCC3-203ENST00000502426 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
ABCC3-203ENST00000502426 EEA1Q15075 1411 aa16.76■□□□□ 0.27
ABCC3-203ENST00000502426 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
ABCC3-203ENST00000502426 CLIP1P30622 1438 aa16.76■□□□□ 0.27
ABCC3-203ENST00000502426 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
ABCC3-203ENST00000502426 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
ABCC3-203ENST00000502426 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
ABCC3-203ENST00000502426 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
ABCC3-203ENST00000502426 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
ABCC3-203ENST00000502426 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
ABCC3-203ENST00000502426 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
ABCC3-203ENST00000502426 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
ABCC3-203ENST00000502426 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
ABCC3-203ENST00000502426 MIER1Q8N108 512 aa16.67■□□□□ 0.26
ABCC3-203ENST00000502426 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
ABCC3-203ENST00000502426 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
ABCC3-203ENST00000502426 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
ABCC3-203ENST00000502426 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
ABCC3-203ENST00000502426 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
ABCC3-203ENST00000502426 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
ABCC3-203ENST00000502426 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
ABCC3-203ENST00000502426 ANP32BQ92688 251 aaKnown RBP16.63■□□□□ 0.25
ABCC3-203ENST00000502426 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
ABCC3-203ENST00000502426 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
ABCC3-203ENST00000502426 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
ABCC3-203ENST00000502426 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
ABCC3-203ENST00000502426 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
ABCC3-203ENST00000502426 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.25
ABCC3-203ENST00000502426 SALL2Q9Y467 1007 aaPredicted RBP16.58■□□□□ 0.24
ABCC3-203ENST00000502426 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
ABCC3-203ENST00000502426 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
ABCC3-203ENST00000502426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCC3-203ENST00000502426 TNIKQ9UKE5 1360 aa16.55■□□□□ 0.24
ABCC3-203ENST00000502426 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
ABCC3-203ENST00000502426 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms