RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
CRNDE-202ENST00000502066 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
CRNDE-202ENST00000502066 SENP3Q9H4L4 574 aaPredicted RBP27.7■■■□□ 2.02
CRNDE-202ENST00000502066 PHF23Q9BUL5 403 aaPredicted RBP27.42■■□□□ 1.98
CRNDE-202ENST00000502066 FOXD1Q16676 465 aa25.94■■□□□ 1.74
CRNDE-202ENST00000502066 PLPPR3Q6T4P5 718 aa24.47■■□□□ 1.51
CRNDE-202ENST00000502066 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
CRNDE-202ENST00000502066 MSH5O43196 834 aa24.2■■□□□ 1.46
CRNDE-202ENST00000502066 PIAS4Q8N2W9 510 aaPredicted RBP24.2■■□□□ 1.46
CRNDE-202ENST00000502066 ADRA2BP18089 450 aa24.15■■□□□ 1.46
CRNDE-202ENST00000502066 POTEDQ86YR6 584 aa23.97■■□□□ 1.43
CRNDE-202ENST00000502066 MAPK8IP2Q13387 824 aaPredicted RBP22.25■■□□□ 1.15
CRNDE-202ENST00000502066 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
CRNDE-202ENST00000502066 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
CRNDE-202ENST00000502066 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
CRNDE-202ENST00000502066 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
CRNDE-202ENST00000502066 HOXD11P31277 338 aaPredicted RBP21.08■□□□□ 0.97
CRNDE-202ENST00000502066 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
CRNDE-202ENST00000502066 CACNB1Q02641 598 aaPredicted RBP20.97■□□□□ 0.95
CRNDE-202ENST00000502066 RNF216Q9NWF9 866 aaPredicted RBP20.89■□□□□ 0.93
CRNDE-202ENST00000502066 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
CRNDE-202ENST00000502066 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
CRNDE-202ENST00000502066 NPM3O75607 178 aaKnown RBP20.34■□□□□ 0.85
CRNDE-202ENST00000502066 C1QBPQ07021 282 aaKnown RBP20.33■□□□□ 0.85
CRNDE-202ENST00000502066 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
CRNDE-202ENST00000502066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.82
CRNDE-202ENST00000502066 KCNA4P22459 653 aa19.88■□□□□ 0.77
CRNDE-202ENST00000502066 U3KPZ7 1027 aaPredicted RBP19.72■□□□□ 0.75
CRNDE-202ENST00000502066 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
CRNDE-202ENST00000502066 CAPN15O75808 1086 aa19.5■□□□□ 0.71
CRNDE-202ENST00000502066 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
CRNDE-202ENST00000502066 DSG3P32926 999 aa19.36■□□□□ 0.69
CRNDE-202ENST00000502066 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
CRNDE-202ENST00000502066 ABCB7O75027 752 aa19.09■□□□□ 0.65
CRNDE-202ENST00000502066 APLP2Q06481 763 aa19■□□□□ 0.63
CRNDE-202ENST00000502066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
CRNDE-202ENST00000502066 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
CRNDE-202ENST00000502066 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
CRNDE-202ENST00000502066 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
CRNDE-202ENST00000502066 POTEHQ6S545 545 aa18.75■□□□□ 0.59
CRNDE-202ENST00000502066 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
CRNDE-202ENST00000502066 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
CRNDE-202ENST00000502066 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
CRNDE-202ENST00000502066 POLA2Q14181 598 aa18.61■□□□□ 0.57
CRNDE-202ENST00000502066 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
CRNDE-202ENST00000502066 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
CRNDE-202ENST00000502066 ABCC9O60706 1549 aa18.43■□□□□ 0.54
CRNDE-202ENST00000502066 RBM42Q9BTD8 480 aaKnown RBP18.38■□□□□ 0.53
CRNDE-202ENST00000502066 ZBTB22O15209 634 aa18.3■□□□□ 0.52
CRNDE-202ENST00000502066 CHRDL2Q6WN34 429 aa18.13■□□□□ 0.49
CRNDE-202ENST00000502066 ZBTB12Q9Y330 459 aaPredicted RBP18.05■□□□□ 0.48
CRNDE-202ENST00000502066 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
CRNDE-202ENST00000502066 AKT1S1Q96B36 256 aa17.96■□□□□ 0.47
CRNDE-202ENST00000502066 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
CRNDE-202ENST00000502066 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
CRNDE-202ENST00000502066 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CRNDE-202ENST00000502066 PIP4P2Q8N4L2 257 aa17.7■□□□□ 0.42
CRNDE-202ENST00000502066 FBLN2P98095 1184 aa17.63■□□□□ 0.41
CRNDE-202ENST00000502066 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
CRNDE-202ENST00000502066 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
CRNDE-202ENST00000502066 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
CRNDE-202ENST00000502066 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
CRNDE-202ENST00000502066 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
CRNDE-202ENST00000502066 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
CRNDE-202ENST00000502066 SP7Q8TDD2 431 aaPredicted RBP17.49■□□□□ 0.39
CRNDE-202ENST00000502066 HAX1O00165 279 aa17.44■□□□□ 0.38
CRNDE-202ENST00000502066 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
CRNDE-202ENST00000502066 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
CRNDE-202ENST00000502066 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
CRNDE-202ENST00000502066 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
CRNDE-202ENST00000502066 EVX2Q03828 476 aa17.27■□□□□ 0.36
CRNDE-202ENST00000502066 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
CRNDE-202ENST00000502066 PRKAR2AP13861 404 aaKnown RBP17.24■□□□□ 0.35
CRNDE-202ENST00000502066 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
CRNDE-202ENST00000502066 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
CRNDE-202ENST00000502066 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
CRNDE-202ENST00000502066 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
CRNDE-202ENST00000502066 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
CRNDE-202ENST00000502066 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
CRNDE-202ENST00000502066 GABBR2O75899 941 aa16.8■□□□□ 0.28
CRNDE-202ENST00000502066 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
CRNDE-202ENST00000502066 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
CRNDE-202ENST00000502066 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
CRNDE-202ENST00000502066 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CRNDE-202ENST00000502066 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
CRNDE-202ENST00000502066 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
CRNDE-202ENST00000502066 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
CRNDE-202ENST00000502066 CUX2O14529 1486 aa16.52■□□□□ 0.23
CRNDE-202ENST00000502066 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
CRNDE-202ENST00000502066 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
CRNDE-202ENST00000502066 POTEIP0CG38 1075 aa16.46■□□□□ 0.23
CRNDE-202ENST00000502066 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
CRNDE-202ENST00000502066 LHX8Q68G74 356 aa16.43■□□□□ 0.22
CRNDE-202ENST00000502066 ILDR1Q86SU0 546 aaPredicted RBP16.41■□□□□ 0.22
CRNDE-202ENST00000502066 ZNF579Q8NAF0 562 aaKnown RBP16.34■□□□□ 0.21
CRNDE-202ENST00000502066 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
CRNDE-202ENST00000502066 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
CRNDE-202ENST00000502066 CLCN6P51797 869 aa16.27■□□□□ 0.2
CRNDE-202ENST00000502066 GALR2O43603 387 aaPredicted RBP16.26■□□□□ 0.19
CRNDE-202ENST00000502066 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms