RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
TRBVA-201ENST00000498804 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
TRBVA-201ENST00000498804 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
TRBVA-201ENST00000498804 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
TRBVA-201ENST00000498804 FOXD1Q16676 465 aa14.55□□□□□ -0.08
TRBVA-201ENST00000498804 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
TRBVA-201ENST00000498804 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
TRBVA-201ENST00000498804 ADRA2BP18089 450 aa13.74□□□□□ -0.21
TRBVA-201ENST00000498804 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
TRBVA-201ENST00000498804 MSH5O43196 834 aa13.65□□□□□ -0.22
TRBVA-201ENST00000498804 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
TRBVA-201ENST00000498804 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
TRBVA-201ENST00000498804 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
TRBVA-201ENST00000498804 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
TRBVA-201ENST00000498804 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
TRBVA-201ENST00000498804 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
TRBVA-201ENST00000498804 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
TRBVA-201ENST00000498804 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
TRBVA-201ENST00000498804 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
TRBVA-201ENST00000498804 KCNA4P22459 653 aa12.06□□□□□ -0.48
TRBVA-201ENST00000498804 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
TRBVA-201ENST00000498804 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
TRBVA-201ENST00000498804 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
TRBVA-201ENST00000498804 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
TRBVA-201ENST00000498804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRBVA-201ENST00000498804 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
TRBVA-201ENST00000498804 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
TRBVA-201ENST00000498804 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
TRBVA-201ENST00000498804 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
TRBVA-201ENST00000498804 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
TRBVA-201ENST00000498804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
TRBVA-201ENST00000498804 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
TRBVA-201ENST00000498804 APLP2Q06481 763 aa11.21□□□□□ -0.61
TRBVA-201ENST00000498804 ZBTB22O15209 634 aa11.18□□□□□ -0.62
TRBVA-201ENST00000498804 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
TRBVA-201ENST00000498804 FOXD4L1Q9NU39 408 aa11.15□□□□□ -0.62
TRBVA-201ENST00000498804 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
TRBVA-201ENST00000498804 CAPN15O75808 1086 aa11.08□□□□□ -0.64
TRBVA-201ENST00000498804 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
TRBVA-201ENST00000498804 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
TRBVA-201ENST00000498804 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
TRBVA-201ENST00000498804 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
TRBVA-201ENST00000498804 DSG3P32926 999 aa10.94□□□□□ -0.66
TRBVA-201ENST00000498804 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
TRBVA-201ENST00000498804 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
TRBVA-201ENST00000498804 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
TRBVA-201ENST00000498804 ABCB7O75027 752 aa10.79□□□□□ -0.68
TRBVA-201ENST00000498804 POLA2Q14181 598 aa10.72□□□□□ -0.69
TRBVA-201ENST00000498804 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
TRBVA-201ENST00000498804 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
TRBVA-201ENST00000498804 FBLN2P98095 1184 aa10.45□□□□□ -0.74
TRBVA-201ENST00000498804 POTEHQ6S545 545 aa10.36□□□□□ -0.75
TRBVA-201ENST00000498804 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
TRBVA-201ENST00000498804 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
TRBVA-201ENST00000498804 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
TRBVA-201ENST00000498804 SPDYE2BA6NHP3 402 aa10.28□□□□□ -0.76
TRBVA-201ENST00000498804 SPDYE6P0CI01 402 aa10.28□□□□□ -0.76
TRBVA-201ENST00000498804 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
TRBVA-201ENST00000498804 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
TRBVA-201ENST00000498804 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
TRBVA-201ENST00000498804 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
TRBVA-201ENST00000498804 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
TRBVA-201ENST00000498804 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
TRBVA-201ENST00000498804 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
TRBVA-201ENST00000498804 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
TRBVA-201ENST00000498804 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
TRBVA-201ENST00000498804 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
TRBVA-201ENST00000498804 FXR2P51116 673 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRBVA-201ENST00000498804 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
TRBVA-201ENST00000498804 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
TRBVA-201ENST00000498804 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
TRBVA-201ENST00000498804 FKBP8Q14318 412 aa9.81□□□□□ -0.84
TRBVA-201ENST00000498804 PRKAR2AP13861 404 aaKnown RBP9.8□□□□□ -0.84
TRBVA-201ENST00000498804 PROM2Q8N271 834 aa9.79□□□□□ -0.84
TRBVA-201ENST00000498804 HAX1O00165 279 aa9.68□□□□□ -0.86
TRBVA-201ENST00000498804 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
TRBVA-201ENST00000498804 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
TRBVA-201ENST00000498804 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
TRBVA-201ENST00000498804 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
TRBVA-201ENST00000498804 C19orf67A6NJJ6 358 aa9.59□□□□□ -0.87
TRBVA-201ENST00000498804 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
TRBVA-201ENST00000498804 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
TRBVA-201ENST00000498804 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRBVA-201ENST00000498804 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
TRBVA-201ENST00000498804 MIER1Q8N108 512 aa9.51□□□□□ -0.89
TRBVA-201ENST00000498804 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
TRBVA-201ENST00000498804 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
TRBVA-201ENST00000498804 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
TRBVA-201ENST00000498804 EVX2Q03828 476 aa9.48□□□□□ -0.89
TRBVA-201ENST00000498804 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
TRBVA-201ENST00000498804 CLCN6P51797 869 aa9.47□□□□□ -0.89
TRBVA-201ENST00000498804 ZRANB1Q9UGI0 708 aa9.41□□□□□ -0.9
TRBVA-201ENST00000498804 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
TRBVA-201ENST00000498804 GABBR2O75899 941 aa9.36□□□□□ -0.91
TRBVA-201ENST00000498804 VASPP50552 380 aaPredicted RBP9.36□□□□□ -0.91
TRBVA-201ENST00000498804 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
TRBVA-201ENST00000498804 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
TRBVA-201ENST00000498804 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
TRBVA-201ENST00000498804 NUBP1P53384 320 aa9.27□□□□□ -0.93
TRBVA-201ENST00000498804 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms