RNA–Protein interactions for RNA: ENST00000498457.1

AC078788.1-201, humanhuman

TSL 3 BASIC

Gene AC078788.1, Length 634 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078788.1-201ENST00000498457 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
AC078788.1-201ENST00000498457 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
AC078788.1-201ENST00000498457 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
AC078788.1-201ENST00000498457 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
AC078788.1-201ENST00000498457 FOXD1Q16676 465 aa22.44■■□□□ 1.18
AC078788.1-201ENST00000498457 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
AC078788.1-201ENST00000498457 MSH5O43196 834 aa21.25■□□□□ 0.99
AC078788.1-201ENST00000498457 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
AC078788.1-201ENST00000498457 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
AC078788.1-201ENST00000498457 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
AC078788.1-201ENST00000498457 ADRA2BP18089 450 aa20.44■□□□□ 0.86
AC078788.1-201ENST00000498457 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
AC078788.1-201ENST00000498457 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
AC078788.1-201ENST00000498457 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
AC078788.1-201ENST00000498457 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
AC078788.1-201ENST00000498457 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
AC078788.1-201ENST00000498457 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
AC078788.1-201ENST00000498457 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
AC078788.1-201ENST00000498457 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
AC078788.1-201ENST00000498457 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
AC078788.1-201ENST00000498457 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
AC078788.1-201ENST00000498457 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
AC078788.1-201ENST00000498457 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
AC078788.1-201ENST00000498457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
AC078788.1-201ENST00000498457 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
AC078788.1-201ENST00000498457 POTEHQ6S545 545 aa16.87■□□□□ 0.29
AC078788.1-201ENST00000498457 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
AC078788.1-201ENST00000498457 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
AC078788.1-201ENST00000498457 DSG3P32926 999 aa16.72■□□□□ 0.27
AC078788.1-201ENST00000498457 CAPN15O75808 1086 aa16.68■□□□□ 0.26
AC078788.1-201ENST00000498457 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
AC078788.1-201ENST00000498457 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
AC078788.1-201ENST00000498457 APLP2Q06481 763 aa16.27■□□□□ 0.2
AC078788.1-201ENST00000498457 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
AC078788.1-201ENST00000498457 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
AC078788.1-201ENST00000498457 ABCB7O75027 752 aa16.23■□□□□ 0.19
AC078788.1-201ENST00000498457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
AC078788.1-201ENST00000498457 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
AC078788.1-201ENST00000498457 KCNA4P22459 653 aa16.03■□□□□ 0.16
AC078788.1-201ENST00000498457 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
AC078788.1-201ENST00000498457 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
AC078788.1-201ENST00000498457 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
AC078788.1-201ENST00000498457 POLA2Q14181 598 aa15.71■□□□□ 0.11
AC078788.1-201ENST00000498457 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
AC078788.1-201ENST00000498457 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
AC078788.1-201ENST00000498457 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
AC078788.1-201ENST00000498457 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
AC078788.1-201ENST00000498457 ZBTB12Q9Y330 459 aaPredicted RBP15.38■□□□□ 0.05
AC078788.1-201ENST00000498457 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
AC078788.1-201ENST00000498457 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
AC078788.1-201ENST00000498457 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
AC078788.1-201ENST00000498457 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
AC078788.1-201ENST00000498457 HAX1O00165 279 aa15.22■□□□□ 0.03
AC078788.1-201ENST00000498457 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
AC078788.1-201ENST00000498457 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
AC078788.1-201ENST00000498457 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
AC078788.1-201ENST00000498457 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
AC078788.1-201ENST00000498457 EVX2Q03828 476 aa14.96□□□□□ -0.01
AC078788.1-201ENST00000498457 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
AC078788.1-201ENST00000498457 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
AC078788.1-201ENST00000498457 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
AC078788.1-201ENST00000498457 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
AC078788.1-201ENST00000498457 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
AC078788.1-201ENST00000498457 FBLN2P98095 1184 aa14.76□□□□□ -0.05
AC078788.1-201ENST00000498457 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
AC078788.1-201ENST00000498457 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
AC078788.1-201ENST00000498457 C19orf67A6NJJ6 358 aa14.71□□□□□ -0.05
AC078788.1-201ENST00000498457 ZBTB22O15209 634 aa14.71□□□□□ -0.05
AC078788.1-201ENST00000498457 GABBR2O75899 941 aa14.62□□□□□ -0.07
AC078788.1-201ENST00000498457 LHX8Q68G74 356 aa14.58□□□□□ -0.08
AC078788.1-201ENST00000498457 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
AC078788.1-201ENST00000498457 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
AC078788.1-201ENST00000498457 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
AC078788.1-201ENST00000498457 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
AC078788.1-201ENST00000498457 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
AC078788.1-201ENST00000498457 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
AC078788.1-201ENST00000498457 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
AC078788.1-201ENST00000498457 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
AC078788.1-201ENST00000498457 CLCN6P51797 869 aa14.24□□□□□ -0.13
AC078788.1-201ENST00000498457 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
AC078788.1-201ENST00000498457 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
AC078788.1-201ENST00000498457 PLSCR2Q9NRY7 297 aa14.11□□□□□ -0.15
AC078788.1-201ENST00000498457 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
AC078788.1-201ENST00000498457 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
AC078788.1-201ENST00000498457 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
AC078788.1-201ENST00000498457 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
AC078788.1-201ENST00000498457 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
AC078788.1-201ENST00000498457 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
AC078788.1-201ENST00000498457 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
AC078788.1-201ENST00000498457 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
AC078788.1-201ENST00000498457 POTEMA6NI47 508 aa13.76□□□□□ -0.21
AC078788.1-201ENST00000498457 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
AC078788.1-201ENST00000498457 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
AC078788.1-201ENST00000498457 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
AC078788.1-201ENST00000498457 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
AC078788.1-201ENST00000498457 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
AC078788.1-201ENST00000498457 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
AC078788.1-201ENST00000498457 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
AC078788.1-201ENST00000498457 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
AC078788.1-201ENST00000498457 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms