RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
PTPRK-215ENST00000498284 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
PTPRK-215ENST00000498284 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
PTPRK-215ENST00000498284 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
PTPRK-215ENST00000498284 FOXD1Q16676 465 aa18.49■□□□□ 0.55
PTPRK-215ENST00000498284 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
PTPRK-215ENST00000498284 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
PTPRK-215ENST00000498284 MSH5O43196 834 aa17.25■□□□□ 0.35
PTPRK-215ENST00000498284 ADRA2BP18089 450 aa17.24■□□□□ 0.35
PTPRK-215ENST00000498284 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
PTPRK-215ENST00000498284 POTEDQ86YR6 584 aa17■□□□□ 0.31
PTPRK-215ENST00000498284 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
PTPRK-215ENST00000498284 KCNA4P22459 653 aa15.83■□□□□ 0.12
PTPRK-215ENST00000498284 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
PTPRK-215ENST00000498284 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
PTPRK-215ENST00000498284 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
PTPRK-215ENST00000498284 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
PTPRK-215ENST00000498284 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
PTPRK-215ENST00000498284 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
PTPRK-215ENST00000498284 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
PTPRK-215ENST00000498284 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-215ENST00000498284 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
PTPRK-215ENST00000498284 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
PTPRK-215ENST00000498284 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
PTPRK-215ENST00000498284 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
PTPRK-215ENST00000498284 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
PTPRK-215ENST00000498284 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
PTPRK-215ENST00000498284 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
PTPRK-215ENST00000498284 ZBTB22O15209 634 aa14.56□□□□□ -0.08
PTPRK-215ENST00000498284 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
PTPRK-215ENST00000498284 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
PTPRK-215ENST00000498284 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
PTPRK-215ENST00000498284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.117e-8■□□□□ 9.4
PTPRK-215ENST00000498284 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-215ENST00000498284 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-215ENST00000498284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-215ENST00000498284 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
PTPRK-215ENST00000498284 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
PTPRK-215ENST00000498284 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-215ENST00000498284 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-215ENST00000498284 APLP2Q06481 763 aa13.85□□□□□ -0.19
PTPRK-215ENST00000498284 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-215ENST00000498284 DSG3P32926 999 aa13.81□□□□□ -0.2
PTPRK-215ENST00000498284 CAPN15O75808 1086 aa13.8□□□□□ -0.2
PTPRK-215ENST00000498284 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-215ENST00000498284 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-215ENST00000498284 ABCB7O75027 752 aa13.51□□□□□ -0.25
PTPRK-215ENST00000498284 POLA2Q14181 598 aa13.45□□□□□ -0.26
PTPRK-215ENST00000498284 POTEHQ6S545 545 aa13.28□□□□□ -0.28
PTPRK-215ENST00000498284 FBLN2P98095 1184 aa13.27□□□□□ -0.29
PTPRK-215ENST00000498284 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-215ENST00000498284 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-215ENST00000498284 FKBP8Q14318 412 aa13.21□□□□□ -0.29
PTPRK-215ENST00000498284 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
PTPRK-215ENST00000498284 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
PTPRK-215ENST00000498284 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
PTPRK-215ENST00000498284 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
PTPRK-215ENST00000498284 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
PTPRK-215ENST00000498284 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
PTPRK-215ENST00000498284 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
PTPRK-215ENST00000498284 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-215ENST00000498284 PROM2Q8N271 834 aa12.84□□□□□ -0.35
PTPRK-215ENST00000498284 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
PTPRK-215ENST00000498284 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
PTPRK-215ENST00000498284 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-215ENST00000498284 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTPRK-215ENST00000498284 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
PTPRK-215ENST00000498284 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
PTPRK-215ENST00000498284 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
PTPRK-215ENST00000498284 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
PTPRK-215ENST00000498284 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-215ENST00000498284 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRK-215ENST00000498284 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-215ENST00000498284 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-215ENST00000498284 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
PTPRK-215ENST00000498284 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-215ENST00000498284 MIER1Q8N108 512 aa12.36□□□□□ -0.43
PTPRK-215ENST00000498284 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
PTPRK-215ENST00000498284 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
PTPRK-215ENST00000498284 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-215ENST00000498284 HAX1O00165 279 aa12.3□□□□□ -0.44
PTPRK-215ENST00000498284 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
PTPRK-215ENST00000498284 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
PTPRK-215ENST00000498284 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
PTPRK-215ENST00000498284 EVX2Q03828 476 aa12.26□□□□□ -0.45
PTPRK-215ENST00000498284 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
PTPRK-215ENST00000498284 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
PTPRK-215ENST00000498284 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-215ENST00000498284 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
PTPRK-215ENST00000498284 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
PTPRK-215ENST00000498284 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
PTPRK-215ENST00000498284 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-215ENST00000498284 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPRK-215ENST00000498284 NUBP1P53384 320 aa12.01□□□□□ -0.49
PTPRK-215ENST00000498284 PKD2Q13563 968 aa12□□□□□ -0.49
PTPRK-215ENST00000498284 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
PTPRK-215ENST00000498284 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-215ENST00000498284 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
PTPRK-215ENST00000498284 GABBR2O75899 941 aa11.92□□□□□ -0.5
PTPRK-215ENST00000498284 GSE1Q14687 1217 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms