RNA–Protein interactions for RNA: ENST00000497691.5

SLC22A23-212, Transcript of solute carrier family 22 member 23, humanhuman

TSL 1 (best)

Gene SLC22A23, Length 2,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A23-212ENST00000497691 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
SLC22A23-212ENST00000497691 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
SLC22A23-212ENST00000497691 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
SLC22A23-212ENST00000497691 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
SLC22A23-212ENST00000497691 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
SLC22A23-212ENST00000497691 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
SLC22A23-212ENST00000497691 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
SLC22A23-212ENST00000497691 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
SLC22A23-212ENST00000497691 NACADO15069 1562 aa25.92■■□□□ 1.74
SLC22A23-212ENST00000497691 ABCC9O60706 1549 aa25.82■■□□□ 1.72
SLC22A23-212ENST00000497691 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
SLC22A23-212ENST00000497691 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
SLC22A23-212ENST00000497691 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
SLC22A23-212ENST00000497691 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
SLC22A23-212ENST00000497691 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
SLC22A23-212ENST00000497691 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
SLC22A23-212ENST00000497691 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
SLC22A23-212ENST00000497691 WIZO95785 1651 aa24.97■■□□□ 1.59
SLC22A23-212ENST00000497691 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
SLC22A23-212ENST00000497691 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
SLC22A23-212ENST00000497691 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
SLC22A23-212ENST00000497691 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
SLC22A23-212ENST00000497691 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
SLC22A23-212ENST00000497691 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
SLC22A23-212ENST00000497691 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
SLC22A23-212ENST00000497691 HRCP23327 699 aa24.67■■□□□ 1.54
SLC22A23-212ENST00000497691 PCGF6Q9BYE7 350 aa24.66■■□□□ 1.54
SLC22A23-212ENST00000497691 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
SLC22A23-212ENST00000497691 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
SLC22A23-212ENST00000497691 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
SLC22A23-212ENST00000497691 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
SLC22A23-212ENST00000497691 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
SLC22A23-212ENST00000497691 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
SLC22A23-212ENST00000497691 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
SLC22A23-212ENST00000497691 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
SLC22A23-212ENST00000497691 EHMT2Q96KQ7 1210 aa24.06■■□□□ 1.44
SLC22A23-212ENST00000497691 EEA1Q15075 1411 aa24.04■■□□□ 1.44
SLC22A23-212ENST00000497691 BAZ1BQ9UIG0 1483 aaKnown RBP24.01■■□□□ 1.43
SLC22A23-212ENST00000497691 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
SLC22A23-212ENST00000497691 SOGA1O94964 1423 aa23.97■■□□□ 1.43
SLC22A23-212ENST00000497691 HMGXB3Q12766 1538 aa23.95■■□□□ 1.42
SLC22A23-212ENST00000497691 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
SLC22A23-212ENST00000497691 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
SLC22A23-212ENST00000497691 TNIKQ9UKE5 1360 aa23.87■■□□□ 1.41
SLC22A23-212ENST00000497691 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
SLC22A23-212ENST00000497691 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
SLC22A23-212ENST00000497691 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
SLC22A23-212ENST00000497691 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
SLC22A23-212ENST00000497691 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
SLC22A23-212ENST00000497691 GOLGA3Q08378 1498 aa23.77■■□□□ 1.4
SLC22A23-212ENST00000497691 KIF21BO75037 1637 aa23.72■■□□□ 1.39
SLC22A23-212ENST00000497691 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
SLC22A23-212ENST00000497691 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
SLC22A23-212ENST00000497691 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.37
SLC22A23-212ENST00000497691 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
SLC22A23-212ENST00000497691 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
SLC22A23-212ENST00000497691 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
SLC22A23-212ENST00000497691 CFTRP13569 1480 aa23.46■■□□□ 1.35
SLC22A23-212ENST00000497691 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
SLC22A23-212ENST00000497691 CLIP1P30622 1438 aa23.42■■□□□ 1.34
SLC22A23-212ENST00000497691 CUX1P39880 1505 aa23.41■■□□□ 1.34
SLC22A23-212ENST00000497691 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.33
SLC22A23-212ENST00000497691 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
SLC22A23-212ENST00000497691 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
SLC22A23-212ENST00000497691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.32
SLC22A23-212ENST00000497691 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
SLC22A23-212ENST00000497691 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
SLC22A23-212ENST00000497691 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
SLC22A23-212ENST00000497691 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
SLC22A23-212ENST00000497691 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
SLC22A23-212ENST00000497691 APLP2Q06481 763 aa23.1■■□□□ 1.29
SLC22A23-212ENST00000497691 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
SLC22A23-212ENST00000497691 CUX2O14529 1486 aa23.01■■□□□ 1.27
SLC22A23-212ENST00000497691 RANGAP1P46060 587 aaPredicted RBP23■■□□□ 1.27
SLC22A23-212ENST00000497691 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
SLC22A23-212ENST00000497691 IGF1RP08069 1367 aa22.98■■□□□ 1.27
SLC22A23-212ENST00000497691 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.27
SLC22A23-212ENST00000497691 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
SLC22A23-212ENST00000497691 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
SLC22A23-212ENST00000497691 HNRNPUL2Q1KMD3 747 aaKnown RBP22.92■■□□□ 1.26
SLC22A23-212ENST00000497691 CARMIL1Q5VZK9 1371 aa22.86■■□□□ 1.25
SLC22A23-212ENST00000497691 KANK4Q5T7N3 995 aaPredicted RBP22.82■■□□□ 1.24
SLC22A23-212ENST00000497691 RRBP1Q9P2E9 1410 aaKnown RBP22.81■■□□□ 1.24
SLC22A23-212ENST00000497691 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
SLC22A23-212ENST00000497691 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
SLC22A23-212ENST00000497691 NESP48681 1621 aa22.8■■□□□ 1.24
SLC22A23-212ENST00000497691 MAP3K1Q13233 1512 aa22.79■■□□□ 1.24
SLC22A23-212ENST00000497691 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
SLC22A23-212ENST00000497691 DIEXFQ68CQ4 756 aaKnown RBP22.75■■□□□ 1.23
SLC22A23-212ENST00000497691 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
SLC22A23-212ENST00000497691 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
SLC22A23-212ENST00000497691 CUL7Q14999 1698 aa22.72■■□□□ 1.23
SLC22A23-212ENST00000497691 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
SLC22A23-212ENST00000497691 TIAM1Q13009 1591 aa22.71■■□□□ 1.23
SLC22A23-212ENST00000497691 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
SLC22A23-212ENST00000497691 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
SLC22A23-212ENST00000497691 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
SLC22A23-212ENST00000497691 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
SLC22A23-212ENST00000497691 CCNB3Q8WWL7 1395 aa22.64■■□□□ 1.22
SLC22A23-212ENST00000497691 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms