RNA–Protein interactions for RNA: ENST00000497644.1

FNDC3A-205, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 3

Gene FNDC3A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-205ENST00000497644 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
FNDC3A-205ENST00000497644 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
FNDC3A-205ENST00000497644 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
FNDC3A-205ENST00000497644 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
FNDC3A-205ENST00000497644 FOXD1Q16676 465 aa22.01■■□□□ 1.11
FNDC3A-205ENST00000497644 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
FNDC3A-205ENST00000497644 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
FNDC3A-205ENST00000497644 ADRA2BP18089 450 aa20.84■□□□□ 0.93
FNDC3A-205ENST00000497644 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
FNDC3A-205ENST00000497644 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
FNDC3A-205ENST00000497644 MSH5O43196 834 aa20.41■□□□□ 0.86
FNDC3A-205ENST00000497644 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
FNDC3A-205ENST00000497644 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
FNDC3A-205ENST00000497644 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
FNDC3A-205ENST00000497644 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
FNDC3A-205ENST00000497644 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
FNDC3A-205ENST00000497644 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
FNDC3A-205ENST00000497644 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
FNDC3A-205ENST00000497644 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
FNDC3A-205ENST00000497644 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
FNDC3A-205ENST00000497644 KCNA4P22459 653 aa18.06■□□□□ 0.48
FNDC3A-205ENST00000497644 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
FNDC3A-205ENST00000497644 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
FNDC3A-205ENST00000497644 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
FNDC3A-205ENST00000497644 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
FNDC3A-205ENST00000497644 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
FNDC3A-205ENST00000497644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
FNDC3A-205ENST00000497644 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
FNDC3A-205ENST00000497644 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
FNDC3A-205ENST00000497644 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
FNDC3A-205ENST00000497644 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
FNDC3A-205ENST00000497644 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
FNDC3A-205ENST00000497644 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
FNDC3A-205ENST00000497644 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
FNDC3A-205ENST00000497644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
FNDC3A-205ENST00000497644 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
FNDC3A-205ENST00000497644 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
FNDC3A-205ENST00000497644 CAPN15O75808 1086 aa16.66■□□□□ 0.26
FNDC3A-205ENST00000497644 ZBTB22O15209 634 aa16.63■□□□□ 0.25
FNDC3A-205ENST00000497644 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
FNDC3A-205ENST00000497644 APLP2Q06481 763 aa16.59■□□□□ 0.25
FNDC3A-205ENST00000497644 DSG3P32926 999 aa16.5■□□□□ 0.23
FNDC3A-205ENST00000497644 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
FNDC3A-205ENST00000497644 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
FNDC3A-205ENST00000497644 ABCB7O75027 752 aa16.31■□□□□ 0.2
FNDC3A-205ENST00000497644 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
FNDC3A-205ENST00000497644 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
FNDC3A-205ENST00000497644 POLA2Q14181 598 aa16.16■□□□□ 0.18
FNDC3A-205ENST00000497644 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
FNDC3A-205ENST00000497644 POTEHQ6S545 545 aa15.96■□□□□ 0.15
FNDC3A-205ENST00000497644 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
FNDC3A-205ENST00000497644 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
FNDC3A-205ENST00000497644 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
FNDC3A-205ENST00000497644 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
FNDC3A-205ENST00000497644 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
FNDC3A-205ENST00000497644 FBLN2P98095 1184 aa15.59■□□□□ 0.09
FNDC3A-205ENST00000497644 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
FNDC3A-205ENST00000497644 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
FNDC3A-205ENST00000497644 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
FNDC3A-205ENST00000497644 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
FNDC3A-205ENST00000497644 SPDYE2Q495Y8 402 aa15.37■□□□□ 0.05
FNDC3A-205ENST00000497644 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
FNDC3A-205ENST00000497644 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
FNDC3A-205ENST00000497644 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
FNDC3A-205ENST00000497644 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
FNDC3A-205ENST00000497644 FKBP8Q14318 412 aa15.2■□□□□ 0.02
FNDC3A-205ENST00000497644 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
FNDC3A-205ENST00000497644 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
FNDC3A-205ENST00000497644 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
FNDC3A-205ENST00000497644 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
FNDC3A-205ENST00000497644 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
FNDC3A-205ENST00000497644 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
FNDC3A-205ENST00000497644 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■■■ 26.8
FNDC3A-205ENST00000497644 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
FNDC3A-205ENST00000497644 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
FNDC3A-205ENST00000497644 PROM2Q8N271 834 aa14.72□□□□□ -0.05
FNDC3A-205ENST00000497644 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
FNDC3A-205ENST00000497644 SP7Q8TDD2 431 aaPredicted RBP14.68□□□□□ -0.06
FNDC3A-205ENST00000497644 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
FNDC3A-205ENST00000497644 HAX1O00165 279 aa14.57□□□□□ -0.08
FNDC3A-205ENST00000497644 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
FNDC3A-205ENST00000497644 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
FNDC3A-205ENST00000497644 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
FNDC3A-205ENST00000497644 EVX2Q03828 476 aa14.46□□□□□ -0.09
FNDC3A-205ENST00000497644 C19orf67A6NJJ6 358 aa14.44□□□□□ -0.1
FNDC3A-205ENST00000497644 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
FNDC3A-205ENST00000497644 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
FNDC3A-205ENST00000497644 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
FNDC3A-205ENST00000497644 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
FNDC3A-205ENST00000497644 MIER1Q8N108 512 aa14.28□□□□□ -0.12
FNDC3A-205ENST00000497644 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
FNDC3A-205ENST00000497644 BCANQ96GW7 911 aa14.22□□□□□ -0.13
FNDC3A-205ENST00000497644 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
FNDC3A-205ENST00000497644 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
FNDC3A-205ENST00000497644 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
FNDC3A-205ENST00000497644 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
FNDC3A-205ENST00000497644 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
FNDC3A-205ENST00000497644 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
FNDC3A-205ENST00000497644 GABBR2O75899 941 aa14.13□□□□□ -0.15
FNDC3A-205ENST00000497644 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms