RNA–Protein interactions for RNA: ENST00000497268.1

ZEB2-223, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 3

Gene ZEB2, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-223ENST00000497268 AEBP2Q6ZN18 517 aaPredicted RBP31.81■■■□□ 2.68
ZEB2-223ENST00000497268 CHIC1Q5VXU3 224 aa29.88■■■□□ 2.37
ZEB2-223ENST00000497268 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
ZEB2-223ENST00000497268 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
ZEB2-223ENST00000497268 FOXD1Q16676 465 aa25.44■■□□□ 1.66
ZEB2-223ENST00000497268 POTEDQ86YR6 584 aa24.1■■□□□ 1.45
ZEB2-223ENST00000497268 MSH5O43196 834 aa24.06■■□□□ 1.44
ZEB2-223ENST00000497268 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
ZEB2-223ENST00000497268 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
ZEB2-223ENST00000497268 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
ZEB2-223ENST00000497268 ADRA2BP18089 450 aa23.37■■□□□ 1.33
ZEB2-223ENST00000497268 MAPK8IP2Q13387 824 aaPredicted RBP21.58■■□□□ 1.05
ZEB2-223ENST00000497268 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
ZEB2-223ENST00000497268 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
ZEB2-223ENST00000497268 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
ZEB2-223ENST00000497268 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
ZEB2-223ENST00000497268 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
ZEB2-223ENST00000497268 HOXD11P31277 338 aaPredicted RBP20.6■□□□□ 0.89
ZEB2-223ENST00000497268 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
ZEB2-223ENST00000497268 RNF39Q9H2S5 420 aa20.42■□□□□ 0.86
ZEB2-223ENST00000497268 RNF216Q9NWF9 866 aaPredicted RBP20.37■□□□□ 0.85
ZEB2-223ENST00000497268 C1QBPQ07021 282 aaKnown RBP20.16■□□□□ 0.82
ZEB2-223ENST00000497268 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.8
ZEB2-223ENST00000497268 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
ZEB2-223ENST00000497268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
ZEB2-223ENST00000497268 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
ZEB2-223ENST00000497268 U3KPZ7 1027 aaPredicted RBP19.15■□□□□ 0.66
ZEB2-223ENST00000497268 CAPN15O75808 1086 aa19.06■□□□□ 0.64
ZEB2-223ENST00000497268 DSG3P32926 999 aa18.99■□□□□ 0.63
ZEB2-223ENST00000497268 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
ZEB2-223ENST00000497268 POTEHQ6S545 545 aa18.84■□□□□ 0.61
ZEB2-223ENST00000497268 KCNA4P22459 653 aa18.74■□□□□ 0.59
ZEB2-223ENST00000497268 APLP2Q06481 763 aa18.74■□□□□ 0.59
ZEB2-223ENST00000497268 SLC4A2P04920 1241 aa18.69■□□□□ 0.58
ZEB2-223ENST00000497268 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
ZEB2-223ENST00000497268 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
ZEB2-223ENST00000497268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
ZEB2-223ENST00000497268 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
ZEB2-223ENST00000497268 ABCB7O75027 752 aa18.54■□□□□ 0.56
ZEB2-223ENST00000497268 SAMD1Q6SPF0 538 aaPredicted RBP18.45■□□□□ 0.54
ZEB2-223ENST00000497268 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
ZEB2-223ENST00000497268 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
ZEB2-223ENST00000497268 POLA2Q14181 598 aa18.04■□□□□ 0.48
ZEB2-223ENST00000497268 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
ZEB2-223ENST00000497268 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
ZEB2-223ENST00000497268 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
ZEB2-223ENST00000497268 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
ZEB2-223ENST00000497268 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
ZEB2-223ENST00000497268 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
ZEB2-223ENST00000497268 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
ZEB2-223ENST00000497268 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
ZEB2-223ENST00000497268 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
ZEB2-223ENST00000497268 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
ZEB2-223ENST00000497268 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
ZEB2-223ENST00000497268 HAX1O00165 279 aa17.25■□□□□ 0.35
ZEB2-223ENST00000497268 FXR2P51116 673 aaKnown RBP eCLIP17.23■□□□□ 0.35
ZEB2-223ENST00000497268 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
ZEB2-223ENST00000497268 ZBTB22O15209 634 aa17.16■□□□□ 0.34
ZEB2-223ENST00000497268 FBLN2P98095 1184 aa17.1■□□□□ 0.33
ZEB2-223ENST00000497268 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
ZEB2-223ENST00000497268 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
ZEB2-223ENST00000497268 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
ZEB2-223ENST00000497268 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
ZEB2-223ENST00000497268 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
ZEB2-223ENST00000497268 EVX2Q03828 476 aa16.88■□□□□ 0.29
ZEB2-223ENST00000497268 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
ZEB2-223ENST00000497268 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
ZEB2-223ENST00000497268 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
ZEB2-223ENST00000497268 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
ZEB2-223ENST00000497268 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
ZEB2-223ENST00000497268 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
ZEB2-223ENST00000497268 GABBR2O75899 941 aa16.55■□□□□ 0.24
ZEB2-223ENST00000497268 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
ZEB2-223ENST00000497268 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
ZEB2-223ENST00000497268 LHX8Q68G74 356 aa16.4■□□□□ 0.22
ZEB2-223ENST00000497268 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
ZEB2-223ENST00000497268 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
ZEB2-223ENST00000497268 CLCN6P51797 869 aa16.25■□□□□ 0.19
ZEB2-223ENST00000497268 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
ZEB2-223ENST00000497268 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
ZEB2-223ENST00000497268 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
ZEB2-223ENST00000497268 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
ZEB2-223ENST00000497268 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
ZEB2-223ENST00000497268 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
ZEB2-223ENST00000497268 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
ZEB2-223ENST00000497268 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
ZEB2-223ENST00000497268 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
ZEB2-223ENST00000497268 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
ZEB2-223ENST00000497268 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
ZEB2-223ENST00000497268 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
ZEB2-223ENST00000497268 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
ZEB2-223ENST00000497268 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
ZEB2-223ENST00000497268 OTUD5Q96G74 571 aa15.65■□□□□ 0.1
ZEB2-223ENST00000497268 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
ZEB2-223ENST00000497268 POTEB2H3BUK9 544 aa15.59■□□□□ 0.09
ZEB2-223ENST00000497268 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
ZEB2-223ENST00000497268 MS4A3Q96HJ5 214 aa15.51■□□□□ 0.07
ZEB2-223ENST00000497268 ASTLQ6HA08 431 aaPredicted RBP15.49■□□□□ 0.07
ZEB2-223ENST00000497268 SLC39A7Q92504 469 aa15.49■□□□□ 0.07
ZEB2-223ENST00000497268 METRNQ9UJH8 293 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms