RNA–Protein interactions for RNA: ENST00000497244.1

CASS4-203, Transcript of Cas scaffold protein family member 4, humanhuman

TSL 1 (best)

Gene CASS4, Length 2,871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4-203ENST00000497244 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
CASS4-203ENST00000497244 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
CASS4-203ENST00000497244 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
CASS4-203ENST00000497244 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
CASS4-203ENST00000497244 CCDC180Q9P1Z9 1646 aa15.59■□□□□ 0.09
CASS4-203ENST00000497244 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
CASS4-203ENST00000497244 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
CASS4-203ENST00000497244 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
CASS4-203ENST00000497244 MYT1Q01538 1121 aa15.27■□□□□ 0.04
CASS4-203ENST00000497244 TTBK1Q5TCY1 1321 aaPredicted RBP15.23■□□□□ 0.03
CASS4-203ENST00000497244 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
CASS4-203ENST00000497244 PRKCSHP14314 528 aaPredicted RBP15.14■□□□□ 0.01
CASS4-203ENST00000497244 APLP2Q06481 763 aa15.11■□□□□ 0.01
CASS4-203ENST00000497244 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
CASS4-203ENST00000497244 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
CASS4-203ENST00000497244 ABCC9O60706 1549 aa14.98□□□□□ -0.01
CASS4-203ENST00000497244 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
CASS4-203ENST00000497244 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
CASS4-203ENST00000497244 AMER1Q5JTC6 1135 aaPredicted RBP14.78□□□□□ -0.04
CASS4-203ENST00000497244 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
CASS4-203ENST00000497244 ARXQ96QS3 562 aa14.63□□□□□ -0.07
CASS4-203ENST00000497244 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
CASS4-203ENST00000497244 KCNA4P22459 653 aa14.6□□□□□ -0.07
CASS4-203ENST00000497244 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
CASS4-203ENST00000497244 NACADO15069 1562 aa14.52□□□□□ -0.09
CASS4-203ENST00000497244 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.09
CASS4-203ENST00000497244 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
CASS4-203ENST00000497244 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
CASS4-203ENST00000497244 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
CASS4-203ENST00000497244 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
CASS4-203ENST00000497244 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
CASS4-203ENST00000497244 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
CASS4-203ENST00000497244 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
CASS4-203ENST00000497244 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
CASS4-203ENST00000497244 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
CASS4-203ENST00000497244 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
CASS4-203ENST00000497244 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
CASS4-203ENST00000497244 HOMEZQ8IX15 550 aa14.16□□□□□ -0.14
CASS4-203ENST00000497244 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
CASS4-203ENST00000497244 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
CASS4-203ENST00000497244 PODXL2Q9NZ53 605 aa14□□□□□ -0.17
CASS4-203ENST00000497244 TPRNQ4KMQ1 711 aa13.97□□□□□ -0.17
CASS4-203ENST00000497244 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
CASS4-203ENST00000497244 BCANQ96GW7 911 aa13.93□□□□□ -0.18
CASS4-203ENST00000497244 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
CASS4-203ENST00000497244 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
CASS4-203ENST00000497244 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
CASS4-203ENST00000497244 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
CASS4-203ENST00000497244 WIZO95785 1651 aa13.79□□□□□ -0.2
CASS4-203ENST00000497244 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
CASS4-203ENST00000497244 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
CASS4-203ENST00000497244 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
CASS4-203ENST00000497244 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
CASS4-203ENST00000497244 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
CASS4-203ENST00000497244 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
CASS4-203ENST00000497244 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
CASS4-203ENST00000497244 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
CASS4-203ENST00000497244 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
CASS4-203ENST00000497244 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
CASS4-203ENST00000497244 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
CASS4-203ENST00000497244 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
CASS4-203ENST00000497244 TOP2AP11388 1531 aaKnown RBP13.52□□□□□ -0.24
CASS4-203ENST00000497244 BCL11AQ9H165 835 aa13.52□□□□□ -0.24
CASS4-203ENST00000497244 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
CASS4-203ENST00000497244 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CASS4-203ENST00000497244 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
CASS4-203ENST00000497244 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
CASS4-203ENST00000497244 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
CASS4-203ENST00000497244 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
CASS4-203ENST00000497244 HMGXB3Q12766 1538 aa13.39□□□□□ -0.27
CASS4-203ENST00000497244 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
CASS4-203ENST00000497244 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
CASS4-203ENST00000497244 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
CASS4-203ENST00000497244 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
CASS4-203ENST00000497244 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
CASS4-203ENST00000497244 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
CASS4-203ENST00000497244 NESP48681 1621 aa13.17□□□□□ -0.3
CASS4-203ENST00000497244 HRCP23327 699 aa13.16□□□□□ -0.3
CASS4-203ENST00000497244 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
CASS4-203ENST00000497244 ZBTB22O15209 634 aa13.12□□□□□ -0.31
CASS4-203ENST00000497244 CFTRP13569 1480 aa13.12□□□□□ -0.31
CASS4-203ENST00000497244 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
CASS4-203ENST00000497244 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
CASS4-203ENST00000497244 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
CASS4-203ENST00000497244 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
CASS4-203ENST00000497244 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
CASS4-203ENST00000497244 UBE2Q2Q8WVN8 375 aa13.05□□□□□ -0.32
CASS4-203ENST00000497244 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
CASS4-203ENST00000497244 TRIM41Q8WV44 630 aa13□□□□□ -0.33
CASS4-203ENST00000497244 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
CASS4-203ENST00000497244 FBLN2P98095 1184 aa12.99□□□□□ -0.33
CASS4-203ENST00000497244 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
CASS4-203ENST00000497244 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
CASS4-203ENST00000497244 CUX1P39880 1505 aa12.97□□□□□ -0.33
CASS4-203ENST00000497244 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
CASS4-203ENST00000497244 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
CASS4-203ENST00000497244 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
CASS4-203ENST00000497244 PDE4CQ08493 712 aa12.91□□□□□ -0.34
CASS4-203ENST00000497244 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
CASS4-203ENST00000497244 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms