RNA–Protein interactions for RNA: ENST00000497137.1

SPTSSB-202, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SPTSSB, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-202ENST00000497137 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
SPTSSB-202ENST00000497137 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
SPTSSB-202ENST00000497137 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
SPTSSB-202ENST00000497137 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
SPTSSB-202ENST00000497137 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
SPTSSB-202ENST00000497137 FOXD1Q16676 465 aa19.33■□□□□ 0.68
SPTSSB-202ENST00000497137 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
SPTSSB-202ENST00000497137 ADRA2BP18089 450 aa18.61■□□□□ 0.57
SPTSSB-202ENST00000497137 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
SPTSSB-202ENST00000497137 MSH5O43196 834 aa17.8■□□□□ 0.44
SPTSSB-202ENST00000497137 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
SPTSSB-202ENST00000497137 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
SPTSSB-202ENST00000497137 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
SPTSSB-202ENST00000497137 KCNA4P22459 653 aa16.76■□□□□ 0.27
SPTSSB-202ENST00000497137 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
SPTSSB-202ENST00000497137 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
SPTSSB-202ENST00000497137 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
SPTSSB-202ENST00000497137 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
SPTSSB-202ENST00000497137 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
SPTSSB-202ENST00000497137 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
SPTSSB-202ENST00000497137 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
SPTSSB-202ENST00000497137 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
SPTSSB-202ENST00000497137 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
SPTSSB-202ENST00000497137 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
SPTSSB-202ENST00000497137 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
SPTSSB-202ENST00000497137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
SPTSSB-202ENST00000497137 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
SPTSSB-202ENST00000497137 ZBTB22O15209 634 aa15.41■□□□□ 0.06
SPTSSB-202ENST00000497137 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
SPTSSB-202ENST00000497137 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
SPTSSB-202ENST00000497137 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
SPTSSB-202ENST00000497137 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
SPTSSB-202ENST00000497137 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
SPTSSB-202ENST00000497137 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
SPTSSB-202ENST00000497137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
SPTSSB-202ENST00000497137 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
SPTSSB-202ENST00000497137 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
SPTSSB-202ENST00000497137 APLP2Q06481 763 aa14.89□□□□□ -0.03
SPTSSB-202ENST00000497137 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
SPTSSB-202ENST00000497137 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
SPTSSB-202ENST00000497137 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
SPTSSB-202ENST00000497137 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
SPTSSB-202ENST00000497137 CAPN15O75808 1086 aa14.78□□□□□ -0.04
SPTSSB-202ENST00000497137 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
SPTSSB-202ENST00000497137 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
SPTSSB-202ENST00000497137 DSG3P32926 999 aa14.53□□□□□ -0.08
SPTSSB-202ENST00000497137 POLA2Q14181 598 aa14.5□□□□□ -0.09
SPTSSB-202ENST00000497137 ABCB7O75027 752 aa14.49□□□□□ -0.09
SPTSSB-202ENST00000497137 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
SPTSSB-202ENST00000497137 FBLN2P98095 1184 aa14.17□□□□□ -0.14
SPTSSB-202ENST00000497137 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
SPTSSB-202ENST00000497137 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
SPTSSB-202ENST00000497137 FKBP8Q14318 412 aa13.85□□□□□ -0.19
SPTSSB-202ENST00000497137 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
SPTSSB-202ENST00000497137 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
SPTSSB-202ENST00000497137 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
SPTSSB-202ENST00000497137 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
SPTSSB-202ENST00000497137 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
SPTSSB-202ENST00000497137 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
SPTSSB-202ENST00000497137 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
SPTSSB-202ENST00000497137 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
SPTSSB-202ENST00000497137 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
SPTSSB-202ENST00000497137 PROM2Q8N271 834 aa13.6□□□□□ -0.23
SPTSSB-202ENST00000497137 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
SPTSSB-202ENST00000497137 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
SPTSSB-202ENST00000497137 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
SPTSSB-202ENST00000497137 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
SPTSSB-202ENST00000497137 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
SPTSSB-202ENST00000497137 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
SPTSSB-202ENST00000497137 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
SPTSSB-202ENST00000497137 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
SPTSSB-202ENST00000497137 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
SPTSSB-202ENST00000497137 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
SPTSSB-202ENST00000497137 MIER1Q8N108 512 aa13.17□□□□□ -0.3
SPTSSB-202ENST00000497137 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPTSSB-202ENST00000497137 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
SPTSSB-202ENST00000497137 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
SPTSSB-202ENST00000497137 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
SPTSSB-202ENST00000497137 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
SPTSSB-202ENST00000497137 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
SPTSSB-202ENST00000497137 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
SPTSSB-202ENST00000497137 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
SPTSSB-202ENST00000497137 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
SPTSSB-202ENST00000497137 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
SPTSSB-202ENST00000497137 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
SPTSSB-202ENST00000497137 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
SPTSSB-202ENST00000497137 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
SPTSSB-202ENST00000497137 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
SPTSSB-202ENST00000497137 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPTSSB-202ENST00000497137 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
SPTSSB-202ENST00000497137 POTEHQ6S545 545 aa12.84□□□□□ -0.35
SPTSSB-202ENST00000497137 NUBP1P53384 320 aa12.8□□□□□ -0.36
SPTSSB-202ENST00000497137 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
SPTSSB-202ENST00000497137 HAX1O00165 279 aa12.7□□□□□ -0.38
SPTSSB-202ENST00000497137 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
SPTSSB-202ENST00000497137 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
SPTSSB-202ENST00000497137 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
SPTSSB-202ENST00000497137 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
SPTSSB-202ENST00000497137 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
SPTSSB-202ENST00000497137 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms