RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
RAB3GAP1-206ENST00000497080 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
RAB3GAP1-206ENST00000497080 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
RAB3GAP1-206ENST00000497080 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
RAB3GAP1-206ENST00000497080 FOXD1Q16676 465 aa22.18■■□□□ 1.14
RAB3GAP1-206ENST00000497080 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
RAB3GAP1-206ENST00000497080 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
RAB3GAP1-206ENST00000497080 ADRA2BP18089 450 aa21.08■□□□□ 0.97
RAB3GAP1-206ENST00000497080 PIAS4Q8N2W9 510 aaPredicted RBP20.82■□□□□ 0.92
RAB3GAP1-206ENST00000497080 MSH5O43196 834 aa20.53■□□□□ 0.88
RAB3GAP1-206ENST00000497080 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
RAB3GAP1-206ENST00000497080 MAPK8IP2Q13387 824 aaPredicted RBP19.25■□□□□ 0.67
RAB3GAP1-206ENST00000497080 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
RAB3GAP1-206ENST00000497080 PPP4R3CPQ6ZMV5 832 aa19.21■□□□□ 0.67
RAB3GAP1-206ENST00000497080 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
RAB3GAP1-206ENST00000497080 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
RAB3GAP1-206ENST00000497080 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
RAB3GAP1-206ENST00000497080 HOXD11P31277 338 aaPredicted RBP18.43■□□□□ 0.54
RAB3GAP1-206ENST00000497080 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
RAB3GAP1-206ENST00000497080 KCNA4P22459 653 aa18.41■□□□□ 0.54
RAB3GAP1-206ENST00000497080 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
RAB3GAP1-206ENST00000497080 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
RAB3GAP1-206ENST00000497080 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
RAB3GAP1-206ENST00000497080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
RAB3GAP1-206ENST00000497080 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
RAB3GAP1-206ENST00000497080 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
RAB3GAP1-206ENST00000497080 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
RAB3GAP1-206ENST00000497080 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
RAB3GAP1-206ENST00000497080 C1QBPQ07021 282 aaKnown RBP17.34■□□□□ 0.37
RAB3GAP1-206ENST00000497080 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
RAB3GAP1-206ENST00000497080 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
RAB3GAP1-206ENST00000497080 ZBTB22O15209 634 aa16.92■□□□□ 0.3
RAB3GAP1-206ENST00000497080 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
RAB3GAP1-206ENST00000497080 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
RAB3GAP1-206ENST00000497080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
RAB3GAP1-206ENST00000497080 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
RAB3GAP1-206ENST00000497080 CAPN15O75808 1086 aa16.85■□□□□ 0.29
RAB3GAP1-206ENST00000497080 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
RAB3GAP1-206ENST00000497080 APLP2Q06481 763 aa16.78■□□□□ 0.28
RAB3GAP1-206ENST00000497080 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
RAB3GAP1-206ENST00000497080 DSG3P32926 999 aa16.63■□□□□ 0.25
RAB3GAP1-206ENST00000497080 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
RAB3GAP1-206ENST00000497080 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
RAB3GAP1-206ENST00000497080 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
RAB3GAP1-206ENST00000497080 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
RAB3GAP1-206ENST00000497080 ABCB7O75027 752 aa16.51■□□□□ 0.23
RAB3GAP1-206ENST00000497080 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
RAB3GAP1-206ENST00000497080 POLA2Q14181 598 aa16.36■□□□□ 0.21
RAB3GAP1-206ENST00000497080 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
RAB3GAP1-206ENST00000497080 FBLN2P98095 1184 aa15.84■□□□□ 0.13
RAB3GAP1-206ENST00000497080 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
RAB3GAP1-206ENST00000497080 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
RAB3GAP1-206ENST00000497080 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
RAB3GAP1-206ENST00000497080 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
RAB3GAP1-206ENST00000497080 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
RAB3GAP1-206ENST00000497080 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
RAB3GAP1-206ENST00000497080 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
RAB3GAP1-206ENST00000497080 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
RAB3GAP1-206ENST00000497080 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
RAB3GAP1-206ENST00000497080 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
RAB3GAP1-206ENST00000497080 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
RAB3GAP1-206ENST00000497080 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
RAB3GAP1-206ENST00000497080 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
RAB3GAP1-206ENST00000497080 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
RAB3GAP1-206ENST00000497080 POTEHQ6S545 545 aa15.22■□□□□ 0.03
RAB3GAP1-206ENST00000497080 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
RAB3GAP1-206ENST00000497080 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
RAB3GAP1-206ENST00000497080 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
RAB3GAP1-206ENST00000497080 FXR2P51116 673 aaKnown RBP eCLIP15.04■□□□□ -02e-10■□□□□ 8
RAB3GAP1-206ENST00000497080 FKBP8Q14318 412 aa15□□□□□ -0.01
RAB3GAP1-206ENST00000497080 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
RAB3GAP1-206ENST00000497080 PROM2Q8N271 834 aa14.93□□□□□ -0.02
RAB3GAP1-206ENST00000497080 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
RAB3GAP1-206ENST00000497080 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
RAB3GAP1-206ENST00000497080 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
RAB3GAP1-206ENST00000497080 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
RAB3GAP1-206ENST00000497080 HAX1O00165 279 aa14.7□□□□□ -0.06
RAB3GAP1-206ENST00000497080 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
RAB3GAP1-206ENST00000497080 EVX2Q03828 476 aa14.57□□□□□ -0.08
RAB3GAP1-206ENST00000497080 MIER1Q8N108 512 aa14.56□□□□□ -0.08
RAB3GAP1-206ENST00000497080 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
RAB3GAP1-206ENST00000497080 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
RAB3GAP1-206ENST00000497080 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
RAB3GAP1-206ENST00000497080 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
RAB3GAP1-206ENST00000497080 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
RAB3GAP1-206ENST00000497080 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
RAB3GAP1-206ENST00000497080 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
RAB3GAP1-206ENST00000497080 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
RAB3GAP1-206ENST00000497080 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
RAB3GAP1-206ENST00000497080 ZRANB1Q9UGI0 708 aa14.33□□□□□ -0.12
RAB3GAP1-206ENST00000497080 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
RAB3GAP1-206ENST00000497080 PAK3O75914 559 aaPredicted RBP14.27□□□□□ -0.13
RAB3GAP1-206ENST00000497080 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
RAB3GAP1-206ENST00000497080 GABBR2O75899 941 aa14.23□□□□□ -0.13
RAB3GAP1-206ENST00000497080 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
RAB3GAP1-206ENST00000497080 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
RAB3GAP1-206ENST00000497080 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
RAB3GAP1-206ENST00000497080 NUBP1P53384 320 aa14.19□□□□□ -0.14
RAB3GAP1-206ENST00000497080 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
RAB3GAP1-206ENST00000497080 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms