RNA–Protein interactions for RNA: ENST00000496796.5

CWF19L1-208, Transcript of CWF19 like cell cycle control factor 1, human

TSL 3

Gene CWF19L1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CWF19L1-208	ENST00000496796	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.19	■■□□□ 1.14
CWF19L1-208	ENST00000496796	CHIC1	Q5VXU3	224 aa		21.48	■■□□□ 1.03
CWF19L1-208	ENST00000496796	PHF23	Q9BUL5	403 aa	Predicted RBP	18.93	■□□□□ 0.62
CWF19L1-208	ENST00000496796	SENP3	Q9H4L4	574 aa	Predicted RBP	18.78	■□□□□ 0.6
CWF19L1-208	ENST00000496796	FOXD1	Q16676	465 aa		17.5	■□□□□ 0.39
CWF19L1-208	ENST00000496796	PLPPR3	Q6T4P5	718 aa		17.37	■□□□□ 0.37
CWF19L1-208	ENST00000496796	PPP6R1	Q9UPN7	881 aa		16.77	■□□□□ 0.28
CWF19L1-208	ENST00000496796	ADRA2B	P18089	450 aa		16.75	■□□□□ 0.27
CWF19L1-208	ENST00000496796	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.47	■□□□□ 0.23
CWF19L1-208	ENST00000496796	MSH5	O43196	834 aa		16.13	■□□□□ 0.17
CWF19L1-208	ENST00000496796	PPP4R3CP	Q6ZMV5	832 aa		15.33	■□□□□ 0.04
CWF19L1-208	ENST00000496796	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.27	■□□□□ 0.04
CWF19L1-208	ENST00000496796	SCAF1	Q9H7N4	1312 aa	Known RBP	15.24	■□□□□ 0.03
CWF19L1-208	ENST00000496796	POTED	Q86YR6	584 aa		14.99	□□□□□ -0.01
CWF19L1-208	ENST00000496796	DMRT2	Q9Y5R5	561 aa		14.97	□□□□□ -0.01
CWF19L1-208	ENST00000496796	CNKSR2	Q8WXI2	1034 aa		14.9	□□□□□ -0.02
CWF19L1-208	ENST00000496796	KCNA4	P22459	653 aa		14.84	□□□□□ -0.03
CWF19L1-208	ENST00000496796	NCBP3	Q53F19	620 aa	Known RBP	14.84	□□□□□ -0.03
CWF19L1-208	ENST00000496796	NPM3	O75607	178 aa	Known RBP	14.67	□□□□□ -0.06
CWF19L1-208	ENST00000496796	RNF216	Q9NWF9	866 aa	Predicted RBP	14.62	□□□□□ -0.07
CWF19L1-208	ENST00000496796	HOXD11	P31277	338 aa	Predicted RBP	14.6	□□□□□ -0.07
CWF19L1-208	ENST00000496796	DCAF8L1	A6NGE4	600 aa		14.44	□□□□□ -0.1
CWF19L1-208	ENST00000496796	DNAJC5B	Q9UF47	199 aa		14.12	□□□□□ -0.15
CWF19L1-208	ENST00000496796	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.08	□□□□□ -0.16
CWF19L1-208	ENST00000496796	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
CWF19L1-208	ENST00000496796	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
CWF19L1-208	ENST00000496796	RNF39	Q9H2S5	420 aa		13.83	□□□□□ -0.2
CWF19L1-208	ENST00000496796		U3KPZ7	1027 aa	Predicted RBP	13.71	□□□□□ -0.21
CWF19L1-208	ENST00000496796	ZBTB22	O15209	634 aa		13.65	□□□□□ -0.22
CWF19L1-208	ENST00000496796	FOXD4L1	Q9NU39	408 aa		13.64	□□□□□ -0.23
CWF19L1-208	ENST00000496796	C1QBP	Q07021	282 aa	Known RBP	13.63	□□□□□ -0.23
CWF19L1-208	ENST00000496796	CACNB1	Q02641	598 aa	Predicted RBP	13.62	□□□□□ -0.23
CWF19L1-208	ENST00000496796	EHMT2	Q96KQ7	1210 aa		13.59	□□□□□ -0.23
CWF19L1-208	ENST00000496796	MYCN	P04198	464 aa	Predicted RBP	13.51	□□□□□ -0.25
CWF19L1-208	ENST00000496796	CSRNP3	Q8WYN3	585 aa		13.46	□□□□□ -0.25
CWF19L1-208	ENST00000496796	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.42	□□□□□ -0.26
CWF19L1-208	ENST00000496796	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.42	□□□□□ -0.26
CWF19L1-208	ENST00000496796	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.42	□□□□□ -0.26
CWF19L1-208	ENST00000496796	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.39	□□□□□ -0.27
CWF19L1-208	ENST00000496796	CAPN15	O75808	1086 aa		13.36	□□□□□ -0.27
CWF19L1-208	ENST00000496796	APLP2	Q06481	763 aa		13.3	□□□□□ -0.28
CWF19L1-208	ENST00000496796	TRH	P20396	242 aa	Predicted RBP	13.28	□□□□□ -0.28
CWF19L1-208	ENST00000496796	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.25	□□□□□ -0.29
CWF19L1-208	ENST00000496796	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.18	□□□□□ -0.3
CWF19L1-208	ENST00000496796	ATXN8OS	P0DMR3	200 aa		13.14	□□□□□ -0.31
CWF19L1-208	ENST00000496796	DSG3	P32926	999 aa		13.14	□□□□□ -0.31
CWF19L1-208	ENST00000496796	ABCB7	O75027	752 aa		13.12	□□□□□ -0.31
CWF19L1-208	ENST00000496796	POLA2	Q14181	598 aa		13.02	□□□□□ -0.33
CWF19L1-208	ENST00000496796	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.68	□□□□□ -0.38
CWF19L1-208	ENST00000496796	FBLN2	P98095	1184 aa		12.63	□□□□□ -0.39
CWF19L1-208	ENST00000496796	MKRN4P	Q13434	485 aa	Predicted RBP	12.63	□□□□□ -0.39
CWF19L1-208	ENST00000496796	OSCAR	Q8IYS5	282 aa		12.57	□□□□□ -0.4
CWF19L1-208	ENST00000496796	RBM42	Q9BTD8	480 aa	Known RBP	12.46	□□□□□ -0.41
CWF19L1-208	ENST00000496796	SPDYE2B	A6NHP3	402 aa		12.37	□□□□□ -0.43
CWF19L1-208	ENST00000496796	SPDYE6	P0CI01	402 aa		12.37	□□□□□ -0.43
CWF19L1-208	ENST00000496796	SPDYE2	Q495Y8	402 aa		12.37	□□□□□ -0.43
CWF19L1-208	ENST00000496796	ZNF692	Q9BU19	519 aa	Predicted RBP	12.36	□□□□□ -0.43
CWF19L1-208	ENST00000496796	AKT1S1	Q96B36	256 aa		12.31	□□□□□ -0.44
CWF19L1-208	ENST00000496796	SPDYE4	A6NLX3	237 aa		12.28	□□□□□ -0.44
CWF19L1-208	ENST00000496796	SSUH2	Q9Y2M2	353 aa		12.25	□□□□□ -0.45
CWF19L1-208	ENST00000496796	REM2	Q8IYK8	340 aa	Predicted RBP	12.22	□□□□□ -0.45
CWF19L1-208	ENST00000496796	FKBP8	Q14318	412 aa		12.19	□□□□□ -0.46
CWF19L1-208	ENST00000496796	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
CWF19L1-208	ENST00000496796	PITPNM1	O00562	1244 aa		12.09	□□□□□ -0.47
CWF19L1-208	ENST00000496796	CLEC11A	Q9Y240	323 aa		12.08	□□□□□ -0.48
CWF19L1-208	ENST00000496796	CHRDL2	Q6WN34	429 aa		12.05	□□□□□ -0.48
CWF19L1-208	ENST00000496796	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.05	□□□□□ -0.48
CWF19L1-208	ENST00000496796	PROM2	Q8N271	834 aa		11.98	□□□□□ -0.49
CWF19L1-208	ENST00000496796	PRR29	P0C7W0	189 aa		11.92	□□□□□ -0.5
CWF19L1-208	ENST00000496796	STAG3	Q9UJ98	1225 aa		11.9	□□□□□ -0.5
CWF19L1-208	ENST00000496796	PIP4P2	Q8N4L2	257 aa		11.89	□□□□□ -0.51
CWF19L1-208	ENST00000496796	FXR2	P51116	673 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
CWF19L1-208	ENST00000496796	POTEH	Q6S545	545 aa		11.84	□□□□□ -0.51
CWF19L1-208	ENST00000496796	CHADL	Q6NUI6	762 aa		11.82	□□□□□ -0.52
CWF19L1-208	ENST00000496796	PRKAR2A	P13861	404 aa	Known RBP	11.8	□□□□□ -0.52
CWF19L1-208	ENST00000496796	CREBZF	Q9NS37	354 aa		11.72	□□□□□ -0.53
CWF19L1-208	ENST00000496796	FBXO3	Q9UK99	471 aa		11.72	□□□□□ -0.53
CWF19L1-208	ENST00000496796	MIER1	Q8N108	512 aa		11.69	□□□□□ -0.54
CWF19L1-208	ENST00000496796	PLCD3	Q8N3E9	789 aa		11.65	□□□□□ -0.54
CWF19L1-208	ENST00000496796	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.62	□□□□□ -0.55
CWF19L1-208	ENST00000496796	VASP	P50552	380 aa	Predicted RBP	11.59	□□□□□ -0.55
CWF19L1-208	ENST00000496796	PLEKHG5	O94827	1062 aa		11.58	□□□□□ -0.56
CWF19L1-208	ENST00000496796	HAX1	O00165	279 aa		11.57	□□□□□ -0.56
CWF19L1-208	ENST00000496796	MNX1	P50219	401 aa	Predicted RBP	11.56	□□□□□ -0.56
CWF19L1-208	ENST00000496796	NPM1	P06748	294 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CWF19L1-208	ENST00000496796	EVX2	Q03828	476 aa		11.48	□□□□□ -0.57
CWF19L1-208	ENST00000496796	KLHL34	Q8N239	644 aa		11.48	□□□□□ -0.57
CWF19L1-208	ENST00000496796	C19orf67	A6NJJ6	358 aa		11.47	□□□□□ -0.57
CWF19L1-208	ENST00000496796	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.46	□□□□□ -0.57
CWF19L1-208	ENST00000496796	CD44	P16070	742 aa	Known RBP	11.44	□□□□□ -0.58
CWF19L1-208	ENST00000496796	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.44	□□□□□ -0.58
CWF19L1-208	ENST00000496796	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.38	□□□□□ -0.59
CWF19L1-208	ENST00000496796	NUBP1	P53384	320 aa		11.37	□□□□□ -0.59
CWF19L1-208	ENST00000496796	RASEF	Q8IZ41	740 aa		11.37	□□□□□ -0.59
CWF19L1-208	ENST00000496796	ZRANB1	Q9UGI0	708 aa		11.37	□□□□□ -0.59
CWF19L1-208	ENST00000496796	PAK3	O75914	559 aa	Predicted RBP	11.34	□□□□□ -0.59
CWF19L1-208	ENST00000496796	SP7	Q8TDD2	431 aa	Predicted RBP	11.31	□□□□□ -0.6
CWF19L1-208	ENST00000496796	SPOCK2	Q92563	424 aa		11.31	□□□□□ -0.6
CWF19L1-208	ENST00000496796	DCAF8	Q5TAQ9	597 aa		11.29	□□□□□ -0.6
CWF19L1-208	ENST00000496796	FAM212A	Q96EL1	285 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms