RNA–Protein interactions for RNA: ENST00000496492.5

TNIK-215, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 1 (best)

Gene TNIK, Length 2,736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-215ENST00000496492 NISCHQ9Y2I1 1504 aa15.76■□□□□ 0.11
TNIK-215ENST00000496492 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
TNIK-215ENST00000496492 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
TNIK-215ENST00000496492 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
TNIK-215ENST00000496492 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
TNIK-215ENST00000496492 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
TNIK-215ENST00000496492 ABCC9O60706 1549 aa12.88□□□□□ -0.35
TNIK-215ENST00000496492 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
TNIK-215ENST00000496492 CHIC1Q5VXU3 224 aa12.78□□□□□ -0.36
TNIK-215ENST00000496492 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
TNIK-215ENST00000496492 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
TNIK-215ENST00000496492 HRCP23327 699 aa12.46□□□□□ -0.42
TNIK-215ENST00000496492 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
TNIK-215ENST00000496492 NACADO15069 1562 aa12.41□□□□□ -0.42
TNIK-215ENST00000496492 RB1CC1Q8TDY2 1594 aa12.38□□□□□ -0.43
TNIK-215ENST00000496492 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
TNIK-215ENST00000496492 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
TNIK-215ENST00000496492 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
TNIK-215ENST00000496492 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
TNIK-215ENST00000496492 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNIK-215ENST00000496492 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
TNIK-215ENST00000496492 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
TNIK-215ENST00000496492 WIZO95785 1651 aa12.18□□□□□ -0.46
TNIK-215ENST00000496492 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
TNIK-215ENST00000496492 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
TNIK-215ENST00000496492 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
TNIK-215ENST00000496492 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
TNIK-215ENST00000496492 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
TNIK-215ENST00000496492 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
TNIK-215ENST00000496492 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
TNIK-215ENST00000496492 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
TNIK-215ENST00000496492 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
TNIK-215ENST00000496492 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
TNIK-215ENST00000496492 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
TNIK-215ENST00000496492 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
TNIK-215ENST00000496492 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
TNIK-215ENST00000496492 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
TNIK-215ENST00000496492 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
TNIK-215ENST00000496492 EEA1Q15075 1411 aa11.8□□□□□ -0.52
TNIK-215ENST00000496492 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
TNIK-215ENST00000496492 SOGA1O94964 1423 aa11.75□□□□□ -0.53
TNIK-215ENST00000496492 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
TNIK-215ENST00000496492 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
TNIK-215ENST00000496492 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
TNIK-215ENST00000496492 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
TNIK-215ENST00000496492 ATAD2BQ9ULI0 1458 aa11.66□□□□□ -0.54
TNIK-215ENST00000496492 KIF21BO75037 1637 aa11.66□□□□□ -0.54
TNIK-215ENST00000496492 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
TNIK-215ENST00000496492 BAZ1BQ9UIG0 1483 aaKnown RBP11.62□□□□□ -0.55
TNIK-215ENST00000496492 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
TNIK-215ENST00000496492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
TNIK-215ENST00000496492 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
TNIK-215ENST00000496492 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
TNIK-215ENST00000496492 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
TNIK-215ENST00000496492 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
TNIK-215ENST00000496492 BIVM-ERCC5R4GMW8 1640 aa11.55□□□□□ -0.56
TNIK-215ENST00000496492 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
TNIK-215ENST00000496492 CLIP1P30622 1438 aa11.51□□□□□ -0.57
TNIK-215ENST00000496492 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
TNIK-215ENST00000496492 HMGXB3Q12766 1538 aa11.49□□□□□ -0.57
TNIK-215ENST00000496492 RAPGEF2Q9Y4G8 1499 aa11.48□□□□□ -0.57
TNIK-215ENST00000496492 TTBK1Q5TCY1 1321 aaPredicted RBP11.47□□□□□ -0.57
TNIK-215ENST00000496492 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
TNIK-215ENST00000496492 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
TNIK-215ENST00000496492 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
TNIK-215ENST00000496492 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
TNIK-215ENST00000496492 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
TNIK-215ENST00000496492 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
TNIK-215ENST00000496492 CUX1P39880 1505 aa11.39□□□□□ -0.59
TNIK-215ENST00000496492 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
TNIK-215ENST00000496492 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
TNIK-215ENST00000496492 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
TNIK-215ENST00000496492 CFTRP13569 1480 aa11.36□□□□□ -0.59
TNIK-215ENST00000496492 APLP2Q06481 763 aa11.34□□□□□ -0.59
TNIK-215ENST00000496492 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
TNIK-215ENST00000496492 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
TNIK-215ENST00000496492 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
TNIK-215ENST00000496492 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
TNIK-215ENST00000496492 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
TNIK-215ENST00000496492 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
TNIK-215ENST00000496492 NESP48681 1621 aa11.26□□□□□ -0.61
TNIK-215ENST00000496492 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
TNIK-215ENST00000496492 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
TNIK-215ENST00000496492 CUX2O14529 1486 aa11.23□□□□□ -0.61
TNIK-215ENST00000496492 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
TNIK-215ENST00000496492 DHX57Q6P158 1386 aaKnown RBP11.22□□□□□ -0.61
TNIK-215ENST00000496492 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.62
TNIK-215ENST00000496492 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.62
TNIK-215ENST00000496492 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
TNIK-215ENST00000496492 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
TNIK-215ENST00000496492 IGF1RP08069 1367 aa11.19□□□□□ -0.62
TNIK-215ENST00000496492 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
TNIK-215ENST00000496492 FGD5Q6ZNL6 1462 aa11.16□□□□□ -0.62
TNIK-215ENST00000496492 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
TNIK-215ENST00000496492 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.62
TNIK-215ENST00000496492 MIER1Q8N108 512 aa11.15□□□□□ -0.62
TNIK-215ENST00000496492 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
TNIK-215ENST00000496492 CARMIL1Q5VZK9 1371 aa11.13□□□□□ -0.63
TNIK-215ENST00000496492 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
TNIK-215ENST00000496492 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms