RNA–Protein interactions for RNA: ENST00000496029.1

BBS9-214, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 2

Gene BBS9, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-214ENST00000496029 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
BBS9-214ENST00000496029 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
BBS9-214ENST00000496029 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
BBS9-214ENST00000496029 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
BBS9-214ENST00000496029 FOXD1Q16676 465 aa19.84■□□□□ 0.77
BBS9-214ENST00000496029 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
BBS9-214ENST00000496029 ADRA2BP18089 450 aa18.81■□□□□ 0.6
BBS9-214ENST00000496029 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
BBS9-214ENST00000496029 PIAS4Q8N2W9 510 aaPredicted RBP18.67■□□□□ 0.58
BBS9-214ENST00000496029 MSH5O43196 834 aa18.46■□□□□ 0.55
BBS9-214ENST00000496029 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
BBS9-214ENST00000496029 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
BBS9-214ENST00000496029 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
BBS9-214ENST00000496029 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
BBS9-214ENST00000496029 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
BBS9-214ENST00000496029 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
BBS9-214ENST00000496029 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
BBS9-214ENST00000496029 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
BBS9-214ENST00000496029 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
BBS9-214ENST00000496029 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
BBS9-214ENST00000496029 KCNA4P22459 653 aa16.33■□□□□ 0.2
BBS9-214ENST00000496029 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
BBS9-214ENST00000496029 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
BBS9-214ENST00000496029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
BBS9-214ENST00000496029 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
BBS9-214ENST00000496029 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
BBS9-214ENST00000496029 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
BBS9-214ENST00000496029 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
BBS9-214ENST00000496029 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
BBS9-214ENST00000496029 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
BBS9-214ENST00000496029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
BBS9-214ENST00000496029 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
BBS9-214ENST00000496029 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
BBS9-214ENST00000496029 CAPN15O75808 1086 aa15.12■□□□□ 0.01
BBS9-214ENST00000496029 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
BBS9-214ENST00000496029 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
BBS9-214ENST00000496029 APLP2Q06481 763 aa15.08■□□□□ 0
BBS9-214ENST00000496029 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
BBS9-214ENST00000496029 ZBTB22O15209 634 aa15□□□□□ -0.01
BBS9-214ENST00000496029 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
BBS9-214ENST00000496029 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
BBS9-214ENST00000496029 DSG3P32926 999 aa14.88□□□□□ -0.03
BBS9-214ENST00000496029 ABCB7O75027 752 aa14.8□□□□□ -0.04
BBS9-214ENST00000496029 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
BBS9-214ENST00000496029 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
BBS9-214ENST00000496029 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
BBS9-214ENST00000496029 POLA2Q14181 598 aa14.61□□□□□ -0.07
BBS9-214ENST00000496029 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
BBS9-214ENST00000496029 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
BBS9-214ENST00000496029 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
BBS9-214ENST00000496029 FBLN2P98095 1184 aa14.17□□□□□ -0.14
BBS9-214ENST00000496029 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
BBS9-214ENST00000496029 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
BBS9-214ENST00000496029 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
BBS9-214ENST00000496029 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
BBS9-214ENST00000496029 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
BBS9-214ENST00000496029 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
BBS9-214ENST00000496029 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
BBS9-214ENST00000496029 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
BBS9-214ENST00000496029 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
BBS9-214ENST00000496029 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
BBS9-214ENST00000496029 POTEHQ6S545 545 aa13.72□□□□□ -0.21
BBS9-214ENST00000496029 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
BBS9-214ENST00000496029 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
BBS9-214ENST00000496029 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
BBS9-214ENST00000496029 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
BBS9-214ENST00000496029 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
BBS9-214ENST00000496029 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
BBS9-214ENST00000496029 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
BBS9-214ENST00000496029 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
BBS9-214ENST00000496029 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
BBS9-214ENST00000496029 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
BBS9-214ENST00000496029 FKBP8Q14318 412 aa13.31□□□□□ -0.28
BBS9-214ENST00000496029 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
BBS9-214ENST00000496029 PROM2Q8N271 834 aa13.24□□□□□ -0.29
BBS9-214ENST00000496029 HAX1O00165 279 aa13.21□□□□□ -0.29
BBS9-214ENST00000496029 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
BBS9-214ENST00000496029 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
BBS9-214ENST00000496029 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
BBS9-214ENST00000496029 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
BBS9-214ENST00000496029 EVX2Q03828 476 aa13.01□□□□□ -0.33
BBS9-214ENST00000496029 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
BBS9-214ENST00000496029 MIER1Q8N108 512 aa12.96□□□□□ -0.33
BBS9-214ENST00000496029 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
BBS9-214ENST00000496029 NPM1P06748 294 aaKnown RBP eCLIP12.92□□□□□ -0.34
BBS9-214ENST00000496029 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
BBS9-214ENST00000496029 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
BBS9-214ENST00000496029 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
BBS9-214ENST00000496029 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
BBS9-214ENST00000496029 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
BBS9-214ENST00000496029 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
BBS9-214ENST00000496029 GABBR2O75899 941 aa12.75□□□□□ -0.37
BBS9-214ENST00000496029 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
BBS9-214ENST00000496029 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
BBS9-214ENST00000496029 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
BBS9-214ENST00000496029 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
BBS9-214ENST00000496029 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
BBS9-214ENST00000496029 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
BBS9-214ENST00000496029 CLCN6P51797 869 aa12.64□□□□□ -0.39
BBS9-214ENST00000496029 NUBP1P53384 320 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms