RNA–Protein interactions for RNA: ENST00000496007.5

CCNL2-218, Transcript of cyclin L2, humanhuman

TSL 2

Gene CCNL2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2-218ENST00000496007 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
CCNL2-218ENST00000496007 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
CCNL2-218ENST00000496007 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
CCNL2-218ENST00000496007 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.38
CCNL2-218ENST00000496007 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
CCNL2-218ENST00000496007 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
CCNL2-218ENST00000496007 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
CCNL2-218ENST00000496007 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
CCNL2-218ENST00000496007 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
CCNL2-218ENST00000496007 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
CCNL2-218ENST00000496007 HRCP23327 699 aa21.99■■□□□ 1.11
CCNL2-218ENST00000496007 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
CCNL2-218ENST00000496007 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
CCNL2-218ENST00000496007 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
CCNL2-218ENST00000496007 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
CCNL2-218ENST00000496007 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
CCNL2-218ENST00000496007 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
CCNL2-218ENST00000496007 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
CCNL2-218ENST00000496007 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.96
CCNL2-218ENST00000496007 ABCC9O60706 1549 aa21.06■□□□□ 0.96
CCNL2-218ENST00000496007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
CCNL2-218ENST00000496007 SCRIBQ14160 1630 aa21■□□□□ 0.95
CCNL2-218ENST00000496007 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
CCNL2-218ENST00000496007 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
CCNL2-218ENST00000496007 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
CCNL2-218ENST00000496007 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
CCNL2-218ENST00000496007 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.913e-8■■□□□ 11.8
CCNL2-218ENST00000496007 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
CCNL2-218ENST00000496007 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
CCNL2-218ENST00000496007 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
CCNL2-218ENST00000496007 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
CCNL2-218ENST00000496007 APLP2Q06481 763 aa20.57■□□□□ 0.88
CCNL2-218ENST00000496007 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
CCNL2-218ENST00000496007 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
CCNL2-218ENST00000496007 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
CCNL2-218ENST00000496007 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
CCNL2-218ENST00000496007 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
CCNL2-218ENST00000496007 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
CCNL2-218ENST00000496007 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
CCNL2-218ENST00000496007 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
CCNL2-218ENST00000496007 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
CCNL2-218ENST00000496007 ITGAEP38570 1179 aa20.31■□□□□ 0.84
CCNL2-218ENST00000496007 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
CCNL2-218ENST00000496007 WIZO95785 1651 aa20.18■□□□□ 0.82
CCNL2-218ENST00000496007 SOGA1O94964 1423 aa20.15■□□□□ 0.82
CCNL2-218ENST00000496007 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
CCNL2-218ENST00000496007 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
CCNL2-218ENST00000496007 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
CCNL2-218ENST00000496007 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
CCNL2-218ENST00000496007 NACADO15069 1562 aa20.02■□□□□ 0.8
CCNL2-218ENST00000496007 MIER1Q8N108 512 aa19.97■□□□□ 0.79
CCNL2-218ENST00000496007 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
CCNL2-218ENST00000496007 BAZ1AQ9NRL2 1556 aaPredicted RBP19.88■□□□□ 0.77
CCNL2-218ENST00000496007 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
CCNL2-218ENST00000496007 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
CCNL2-218ENST00000496007 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
CCNL2-218ENST00000496007 CLIP1P30622 1438 aa19.8■□□□□ 0.76
CCNL2-218ENST00000496007 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
CCNL2-218ENST00000496007 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
CCNL2-218ENST00000496007 BCANQ96GW7 911 aa19.68■□□□□ 0.74
CCNL2-218ENST00000496007 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
CCNL2-218ENST00000496007 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
CCNL2-218ENST00000496007 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
CCNL2-218ENST00000496007 EEA1Q15075 1411 aa19.58■□□□□ 0.73
CCNL2-218ENST00000496007 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
CCNL2-218ENST00000496007 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
CCNL2-218ENST00000496007 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
CCNL2-218ENST00000496007 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
CCNL2-218ENST00000496007 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
CCNL2-218ENST00000496007 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
CCNL2-218ENST00000496007 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
CCNL2-218ENST00000496007 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
CCNL2-218ENST00000496007 MYT1Q01538 1121 aa19.46■□□□□ 0.71
CCNL2-218ENST00000496007 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
CCNL2-218ENST00000496007 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
CCNL2-218ENST00000496007 NEFLP07196 543 aa19.38■□□□□ 0.69
CCNL2-218ENST00000496007 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
CCNL2-218ENST00000496007 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
CCNL2-218ENST00000496007 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
CCNL2-218ENST00000496007 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
CCNL2-218ENST00000496007 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
CCNL2-218ENST00000496007 FKBP8Q14318 412 aa19.28■□□□□ 0.68
CCNL2-218ENST00000496007 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
CCNL2-218ENST00000496007 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
CCNL2-218ENST00000496007 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
CCNL2-218ENST00000496007 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
CCNL2-218ENST00000496007 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
CCNL2-218ENST00000496007 ANP32CO43423 234 aa19.19■□□□□ 0.66
CCNL2-218ENST00000496007 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
CCNL2-218ENST00000496007 KIF21BO75037 1637 aa19.16■□□□□ 0.66
CCNL2-218ENST00000496007 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
CCNL2-218ENST00000496007 CUX2O14529 1486 aa19.13■□□□□ 0.65
CCNL2-218ENST00000496007 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
CCNL2-218ENST00000496007 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
CCNL2-218ENST00000496007 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
CCNL2-218ENST00000496007 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
CCNL2-218ENST00000496007 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.64
CCNL2-218ENST00000496007 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
CCNL2-218ENST00000496007 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
CCNL2-218ENST00000496007 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms