RNA–Protein interactions for RNA: ENST00000494736.1

CCT6A-209, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 2

Gene CCT6A, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-209ENST00000494736 AEBP2Q6ZN18 517 aaPredicted RBP33.39■■■□□ 2.94
CCT6A-209ENST00000494736 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
CCT6A-209ENST00000494736 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
CCT6A-209ENST00000494736 SENP3Q9H4L4 574 aaPredicted RBP28.31■■■□□ 2.12
CCT6A-209ENST00000494736 FOXD1Q16676 465 aa26.38■■□□□ 1.81
CCT6A-209ENST00000494736 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
CCT6A-209ENST00000494736 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
CCT6A-209ENST00000494736 ADRA2BP18089 450 aa25.06■■□□□ 1.6
CCT6A-209ENST00000494736 PIAS4Q8N2W9 510 aaPredicted RBP24.74■■□□□ 1.55
CCT6A-209ENST00000494736 MSH5O43196 834 aa24.4■■□□□ 1.5
CCT6A-209ENST00000494736 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
CCT6A-209ENST00000494736 MAPK8IP2Q13387 824 aaPredicted RBP22.86■■□□□ 1.25
CCT6A-209ENST00000494736 PPP4R3CPQ6ZMV5 832 aa22.85■■□□□ 1.25
CCT6A-209ENST00000494736 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
CCT6A-209ENST00000494736 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
CCT6A-209ENST00000494736 CNKSR2Q8WXI2 1034 aa22.27■■□□□ 1.16
CCT6A-209ENST00000494736 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
CCT6A-209ENST00000494736 HOXD11P31277 338 aaPredicted RBP21.96■■□□□ 1.11
CCT6A-209ENST00000494736 KCNA4P22459 653 aa21.93■■□□□ 1.1
CCT6A-209ENST00000494736 RNF216Q9NWF9 866 aaPredicted RBP21.93■■□□□ 1.1
CCT6A-209ENST00000494736 NPM3O75607 178 aaKnown RBP21.84■■□□□ 1.09
CCT6A-209ENST00000494736 DCAF8L1A6NGE4 600 aa21.58■■□□□ 1.05
CCT6A-209ENST00000494736 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
CCT6A-209ENST00000494736 RNF39Q9H2S5 420 aa20.92■□□□□ 0.94
CCT6A-209ENST00000494736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.938e-6■■■□□ 19
CCT6A-209ENST00000494736 SLC4A1APQ9BWU0 796 aaKnown RBP20.78■□□□□ 0.92
CCT6A-209ENST00000494736 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
CCT6A-209ENST00000494736 CACNB1Q02641 598 aaPredicted RBP20.61■□□□□ 0.89
CCT6A-209ENST00000494736 C1QBPQ07021 282 aaKnown RBP20.61■□□□□ 0.89
CCT6A-209ENST00000494736 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
CCT6A-209ENST00000494736 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
CCT6A-209ENST00000494736 ZBTB22O15209 634 aa20.21■□□□□ 0.83
CCT6A-209ENST00000494736 MYCNP04198 464 aaPredicted RBP20.14■□□□□ 0.81
CCT6A-209ENST00000494736 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
CCT6A-209ENST00000494736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
CCT6A-209ENST00000494736 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
CCT6A-209ENST00000494736 SAMD1Q6SPF0 538 aaPredicted RBP20.02■□□□□ 0.8
CCT6A-209ENST00000494736 CAPN15O75808 1086 aa19.99■□□□□ 0.79
CCT6A-209ENST00000494736 APLP2Q06481 763 aa19.94■□□□□ 0.78
CCT6A-209ENST00000494736 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
CCT6A-209ENST00000494736 DSG3P32926 999 aa19.78■□□□□ 0.76
CCT6A-209ENST00000494736 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
CCT6A-209ENST00000494736 ZNF219Q9P2Y4 722 aaPredicted RBP19.77■□□□□ 0.76
CCT6A-209ENST00000494736 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
CCT6A-209ENST00000494736 ATF5Q9Y2D1 282 aaPredicted RBP19.71■□□□□ 0.75
CCT6A-209ENST00000494736 ABCB7O75027 752 aa19.61■□□□□ 0.73
CCT6A-209ENST00000494736 ATXN8OSP0DMR3 200 aa19.56■□□□□ 0.72
CCT6A-209ENST00000494736 POLA2Q14181 598 aa19.43■□□□□ 0.7
CCT6A-209ENST00000494736 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
CCT6A-209ENST00000494736 MKRN4PQ13434 485 aaPredicted RBP18.83■□□□□ 0.6
CCT6A-209ENST00000494736 FBLN2P98095 1184 aa18.81■□□□□ 0.6
CCT6A-209ENST00000494736 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
CCT6A-209ENST00000494736 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
CCT6A-209ENST00000494736 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
CCT6A-209ENST00000494736 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
CCT6A-209ENST00000494736 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
CCT6A-209ENST00000494736 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
CCT6A-209ENST00000494736 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
CCT6A-209ENST00000494736 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
CCT6A-209ENST00000494736 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
CCT6A-209ENST00000494736 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
CCT6A-209ENST00000494736 SPDYE4A6NLX3 237 aa18.17■□□□□ 0.5
CCT6A-209ENST00000494736 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
CCT6A-209ENST00000494736 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCT6A-209ENST00000494736 POTEHQ6S545 545 aa18.05■□□□□ 0.48
CCT6A-209ENST00000494736 SPDYE1Q8NFV5 336 aaPredicted RBP18.04■□□□□ 0.48
CCT6A-209ENST00000494736 CLEC11AQ9Y240 323 aa17.99■□□□□ 0.47
CCT6A-209ENST00000494736 PIP4P2Q8N4L2 257 aa17.91■□□□□ 0.46
CCT6A-209ENST00000494736 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCT6A-209ENST00000494736 PROM2Q8N271 834 aa17.86■□□□□ 0.45
CCT6A-209ENST00000494736 FKBP8Q14318 412 aa17.85■□□□□ 0.45
CCT6A-209ENST00000494736 PRR29P0C7W0 189 aa17.77■□□□□ 0.44
CCT6A-209ENST00000494736 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
CCT6A-209ENST00000494736 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
CCT6A-209ENST00000494736 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
CCT6A-209ENST00000494736 CREBZFQ9NS37 354 aa17.51■□□□□ 0.39
CCT6A-209ENST00000494736 HAX1O00165 279 aa17.41■□□□□ 0.38
CCT6A-209ENST00000494736 FARP1Q9Y4F1 1045 aaPredicted RBP17.41■□□□□ 0.38
CCT6A-209ENST00000494736 EVX2Q03828 476 aa17.31■□□□□ 0.36
CCT6A-209ENST00000494736 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
CCT6A-209ENST00000494736 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
CCT6A-209ENST00000494736 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
CCT6A-209ENST00000494736 MIER1Q8N108 512 aa17.25■□□□□ 0.35
CCT6A-209ENST00000494736 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
CCT6A-209ENST00000494736 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
CCT6A-209ENST00000494736 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
CCT6A-209ENST00000494736 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCT6A-209ENST00000494736 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
CCT6A-209ENST00000494736 VASPP50552 380 aaPredicted RBP17.09■□□□□ 0.33
CCT6A-209ENST00000494736 ZRANB1Q9UGI0 708 aa17■□□□□ 0.31
CCT6A-209ENST00000494736 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
CCT6A-209ENST00000494736 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
CCT6A-209ENST00000494736 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
CCT6A-209ENST00000494736 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
CCT6A-209ENST00000494736 GABBR2O75899 941 aa16.9■□□□□ 0.3
CCT6A-209ENST00000494736 NUBP1P53384 320 aa16.9■□□□□ 0.3
CCT6A-209ENST00000494736 TSPYL2Q9H2G4 693 aaPredicted RBP16.89■□□□□ 0.29
CCT6A-209ENST00000494736 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
CCT6A-209ENST00000494736 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
CCT6A-209ENST00000494736 PHF12Q96QT6 1004 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms