RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
RPGR-209ENST00000494707 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
RPGR-209ENST00000494707 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
RPGR-209ENST00000494707 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
RPGR-209ENST00000494707 FOXD1Q16676 465 aa14.46□□□□□ -0.09
RPGR-209ENST00000494707 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
RPGR-209ENST00000494707 MSH5O43196 834 aa13.79□□□□□ -0.2
RPGR-209ENST00000494707 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
RPGR-209ENST00000494707 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
RPGR-209ENST00000494707 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
RPGR-209ENST00000494707 ADRA2BP18089 450 aa13.21□□□□□ -0.29
RPGR-209ENST00000494707 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
RPGR-209ENST00000494707 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
RPGR-209ENST00000494707 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
RPGR-209ENST00000494707 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
RPGR-209ENST00000494707 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
RPGR-209ENST00000494707 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
RPGR-209ENST00000494707 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
RPGR-209ENST00000494707 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
RPGR-209ENST00000494707 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
RPGR-209ENST00000494707 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
RPGR-209ENST00000494707 C1QBPQ07021 282 aaKnown RBP11.54□□□□□ -0.56
RPGR-209ENST00000494707 DNAJC5BQ9UF47 199 aa11.46□□□□□ -0.57
RPGR-209ENST00000494707 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
RPGR-209ENST00000494707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.61
RPGR-209ENST00000494707 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
RPGR-209ENST00000494707 POTEHQ6S545 545 aa10.86□□□□□ -0.67
RPGR-209ENST00000494707 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
RPGR-209ENST00000494707 CAPN15O75808 1086 aa10.85□□□□□ -0.67
RPGR-209ENST00000494707 DSG3P32926 999 aa10.8□□□□□ -0.68
RPGR-209ENST00000494707 APLP2Q06481 763 aa10.76□□□□□ -0.69
RPGR-209ENST00000494707 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
RPGR-209ENST00000494707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
RPGR-209ENST00000494707 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
RPGR-209ENST00000494707 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
RPGR-209ENST00000494707 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
RPGR-209ENST00000494707 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
RPGR-209ENST00000494707 KCNA4P22459 653 aa10.52□□□□□ -0.73
RPGR-209ENST00000494707 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
RPGR-209ENST00000494707 ABCB7O75027 752 aa10.51□□□□□ -0.73
RPGR-209ENST00000494707 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
RPGR-209ENST00000494707 MYCNP04198 464 aaPredicted RBP10.27□□□□□ -0.77
RPGR-209ENST00000494707 POLA2Q14181 598 aa10.24□□□□□ -0.77
RPGR-209ENST00000494707 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
RPGR-209ENST00000494707 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
RPGR-209ENST00000494707 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
RPGR-209ENST00000494707 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
RPGR-209ENST00000494707 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
RPGR-209ENST00000494707 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
RPGR-209ENST00000494707 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
RPGR-209ENST00000494707 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
RPGR-209ENST00000494707 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
RPGR-209ENST00000494707 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
RPGR-209ENST00000494707 HAX1O00165 279 aa9.86□□□□□ -0.83
RPGR-209ENST00000494707 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
RPGR-209ENST00000494707 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
RPGR-209ENST00000494707 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
RPGR-209ENST00000494707 FBLN2P98095 1184 aa9.75□□□□□ -0.85
RPGR-209ENST00000494707 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
RPGR-209ENST00000494707 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
RPGR-209ENST00000494707 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
RPGR-209ENST00000494707 ZBTB22O15209 634 aa9.67□□□□□ -0.86
RPGR-209ENST00000494707 SPDYE1Q8NFV5 336 aaPredicted RBP9.66□□□□□ -0.86
RPGR-209ENST00000494707 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
RPGR-209ENST00000494707 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
RPGR-209ENST00000494707 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
RPGR-209ENST00000494707 EVX2Q03828 476 aa9.55□□□□□ -0.88
RPGR-209ENST00000494707 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
RPGR-209ENST00000494707 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
RPGR-209ENST00000494707 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
RPGR-209ENST00000494707 GABBR2O75899 941 aa9.43□□□□□ -0.9
RPGR-209ENST00000494707 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
RPGR-209ENST00000494707 LHX8Q68G74 356 aa9.39□□□□□ -0.91
RPGR-209ENST00000494707 CLCN6P51797 869 aa9.37□□□□□ -0.91
RPGR-209ENST00000494707 PABPN1Q86U42 306 aaKnown RBP eCLIP9.37□□□□□ -0.91
RPGR-209ENST00000494707 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
RPGR-209ENST00000494707 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
RPGR-209ENST00000494707 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
RPGR-209ENST00000494707 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
RPGR-209ENST00000494707 FARP1Q9Y4F1 1045 aaPredicted RBP9.26□□□□□ -0.93
RPGR-209ENST00000494707 DCBLD2Q96PD2 775 aa9.2□□□□□ -0.94
RPGR-209ENST00000494707 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
RPGR-209ENST00000494707 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
RPGR-209ENST00000494707 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
RPGR-209ENST00000494707 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
RPGR-209ENST00000494707 ZRANB1Q9UGI0 708 aa9.12□□□□□ -0.95
RPGR-209ENST00000494707 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
RPGR-209ENST00000494707 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
RPGR-209ENST00000494707 NPM1P06748 294 aaKnown RBP eCLIP9.02□□□□□ -0.97
RPGR-209ENST00000494707 GALR2O43603 387 aaPredicted RBP8.98□□□□□ -0.97
RPGR-209ENST00000494707 SPDYE4A6NLX3 237 aa8.96□□□□□ -0.98
RPGR-209ENST00000494707 OTUD5Q96G74 571 aa8.9□□□□□ -0.98
RPGR-209ENST00000494707 PHF12Q96QT6 1004 aa8.9□□□□□ -0.98
RPGR-209ENST00000494707 MAMSTRQ6ZN01 415 aa8.85□□□□□ -0.99
RPGR-209ENST00000494707 SLC39A7Q92504 469 aa8.85□□□□□ -0.99
RPGR-209ENST00000494707 POTEMA6NI47 508 aa8.84□□□□□ -0.99
RPGR-209ENST00000494707 C7P10643 843 aa8.84□□□□□ -0.99
RPGR-209ENST00000494707 PCDH10Q9P2E7 1040 aa8.84□□□□□ -0.99
RPGR-209ENST00000494707 POTEB2H3BUK9 544 aa8.82□□□□□ -1
RPGR-209ENST00000494707 MNX1P50219 401 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms