RNA–Protein interactions for RNA: ENST00000494453.1

HGD-210, Transcript of homogentisate 1,2-dioxygenase, humanhuman

TSL 3

Gene HGD, Length 683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGD-210ENST00000494453 AEBP2Q6ZN18 517 aaPredicted RBP33.6■■■□□ 2.97
HGD-210ENST00000494453 CHIC1Q5VXU3 224 aa32.86■■■□□ 2.85
HGD-210ENST00000494453 PHF23Q9BUL5 403 aaPredicted RBP29.03■■■□□ 2.24
HGD-210ENST00000494453 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
HGD-210ENST00000494453 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
HGD-210ENST00000494453 FOXD1Q16676 465 aa26.36■■□□□ 1.81
HGD-210ENST00000494453 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
HGD-210ENST00000494453 ADRA2BP18089 450 aa25.54■■□□□ 1.68
HGD-210ENST00000494453 PIAS4Q8N2W9 510 aaPredicted RBP24.86■■□□□ 1.57
HGD-210ENST00000494453 MSH5O43196 834 aa24.08■■□□□ 1.45
HGD-210ENST00000494453 PPP4R3CPQ6ZMV5 832 aa23.62■■□□□ 1.37
HGD-210ENST00000494453 KCNA4P22459 653 aa23.35■■□□□ 1.33
HGD-210ENST00000494453 MAPK8IP2Q13387 824 aaPredicted RBP23.16■■□□□ 1.3
HGD-210ENST00000494453 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
HGD-210ENST00000494453 NCBP3Q53F19 620 aaKnown RBP22.91■■□□□ 1.26
HGD-210ENST00000494453 CNKSR2Q8WXI2 1034 aa22.84■■□□□ 1.25
HGD-210ENST00000494453 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
HGD-210ENST00000494453 DMRT2Q9Y5R5 561 aa22.65■■□□□ 1.22
HGD-210ENST00000494453 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
HGD-210ENST00000494453 HOXD11P31277 338 aaPredicted RBP22.25■■□□□ 1.15
HGD-210ENST00000494453 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
HGD-210ENST00000494453 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
HGD-210ENST00000494453 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
HGD-210ENST00000494453 POTEDQ86YR6 584 aa21.76■■□□□ 1.07
HGD-210ENST00000494453 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
HGD-210ENST00000494453 ZBTB22O15209 634 aa21.55■■□□□ 1.04
HGD-210ENST00000494453 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
HGD-210ENST00000494453 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
HGD-210ENST00000494453 FOXD4L1Q9NU39 408 aa21.33■■□□□ 1.01
HGD-210ENST00000494453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.985e-16■■□□□ 12.8
HGD-210ENST00000494453 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
HGD-210ENST00000494453 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
HGD-210ENST00000494453 RNF39Q9H2S5 420 aa20.74■□□□□ 0.91
HGD-210ENST00000494453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
HGD-210ENST00000494453 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
HGD-210ENST00000494453 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
HGD-210ENST00000494453 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
HGD-210ENST00000494453 ATXN8OSP0DMR3 200 aa20.48■□□□□ 0.87
HGD-210ENST00000494453 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
HGD-210ENST00000494453 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
HGD-210ENST00000494453 APLP2Q06481 763 aa20.23■□□□□ 0.83
HGD-210ENST00000494453 CAPN15O75808 1086 aa20.18■□□□□ 0.82
HGD-210ENST00000494453 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
HGD-210ENST00000494453 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
HGD-210ENST00000494453 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
HGD-210ENST00000494453 ABCB7O75027 752 aa19.9■□□□□ 0.78
HGD-210ENST00000494453 POLA2Q14181 598 aa19.86■□□□□ 0.77
HGD-210ENST00000494453 DSG3P32926 999 aa19.82■□□□□ 0.76
HGD-210ENST00000494453 MKRN4PQ13434 485 aaPredicted RBP19.61■□□□□ 0.73
HGD-210ENST00000494453 FBLN2P98095 1184 aa19.44■□□□□ 0.7
HGD-210ENST00000494453 FKBP8Q14318 412 aa19.4■□□□□ 0.7
HGD-210ENST00000494453 ZBTB12Q9Y330 459 aaPredicted RBP19.38■□□□□ 0.69
HGD-210ENST00000494453 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
HGD-210ENST00000494453 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
HGD-210ENST00000494453 SPDYE2BA6NHP3 402 aa18.94■□□□□ 0.62
HGD-210ENST00000494453 SPDYE6P0CI01 402 aa18.94■□□□□ 0.62
HGD-210ENST00000494453 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
HGD-210ENST00000494453 ZNF692Q9BU19 519 aaPredicted RBP18.94■□□□□ 0.62
HGD-210ENST00000494453 SSUH2Q9Y2M2 353 aa18.88■□□□□ 0.61
HGD-210ENST00000494453 PROM2Q8N271 834 aa18.87■□□□□ 0.61
HGD-210ENST00000494453 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
HGD-210ENST00000494453 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
HGD-210ENST00000494453 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
HGD-210ENST00000494453 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
HGD-210ENST00000494453 FBXO3Q9UK99 471 aa18.49■□□□□ 0.55
HGD-210ENST00000494453 VASPP50552 380 aaPredicted RBP18.36■□□□□ 0.53
HGD-210ENST00000494453 SPDYE1Q8NFV5 336 aaPredicted RBP18.34■□□□□ 0.53
HGD-210ENST00000494453 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
HGD-210ENST00000494453 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
HGD-210ENST00000494453 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
HGD-210ENST00000494453 IFNLR1Q8IU57 520 aaPredicted RBP18.19■□□□□ 0.5
HGD-210ENST00000494453 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
HGD-210ENST00000494453 MIER1Q8N108 512 aa18.13■□□□□ 0.49
HGD-210ENST00000494453 PLCD3Q8N3E9 789 aa18.12■□□□□ 0.49
HGD-210ENST00000494453 CREBZFQ9NS37 354 aa18.03■□□□□ 0.48
HGD-210ENST00000494453 RTN4Q9NQC3 1192 aaKnown RBP18.01■□□□□ 0.47
HGD-210ENST00000494453 CHRDL2Q6WN34 429 aa18■□□□□ 0.47
HGD-210ENST00000494453 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
HGD-210ENST00000494453 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
HGD-210ENST00000494453 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
HGD-210ENST00000494453 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
HGD-210ENST00000494453 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
HGD-210ENST00000494453 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
HGD-210ENST00000494453 PIP4P2Q8N4L2 257 aa17.85■□□□□ 0.45
HGD-210ENST00000494453 SPOCK2Q92563 424 aa17.84■□□□□ 0.45
HGD-210ENST00000494453 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
HGD-210ENST00000494453 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
HGD-210ENST00000494453 NUBP1P53384 320 aa17.7■□□□□ 0.42
HGD-210ENST00000494453 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
HGD-210ENST00000494453 PKD2Q13563 968 aa17.65■□□□□ 0.42
HGD-210ENST00000494453 RASEFQ8IZ41 740 aa17.62■□□□□ 0.41
HGD-210ENST00000494453 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
HGD-210ENST00000494453 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
HGD-210ENST00000494453 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
HGD-210ENST00000494453 FAM212AQ96EL1 285 aa17.47■□□□□ 0.39
HGD-210ENST00000494453 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
HGD-210ENST00000494453 ECM2O94769 699 aaPredicted RBP17.44■□□□□ 0.38
HGD-210ENST00000494453 GSE1Q14687 1217 aa17.43■□□□□ 0.38
HGD-210ENST00000494453 RGL2O15211 777 aa17.35■□□□□ 0.37
HGD-210ENST00000494453 PYGBP11216 843 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms