RNA–Protein interactions for RNA: ENST00000494444.2

PTP4A2-207, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-207ENST00000494444 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
PTP4A2-207ENST00000494444 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
PTP4A2-207ENST00000494444 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
PTP4A2-207ENST00000494444 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
PTP4A2-207ENST00000494444 FOXD1Q16676 465 aa20.12■□□□□ 0.81
PTP4A2-207ENST00000494444 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
PTP4A2-207ENST00000494444 MSH5O43196 834 aa18.98■□□□□ 0.63
PTP4A2-207ENST00000494444 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
PTP4A2-207ENST00000494444 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
PTP4A2-207ENST00000494444 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
PTP4A2-207ENST00000494444 ADRA2BP18089 450 aa18.42■□□□□ 0.54
PTP4A2-207ENST00000494444 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
PTP4A2-207ENST00000494444 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
PTP4A2-207ENST00000494444 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
PTP4A2-207ENST00000494444 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
PTP4A2-207ENST00000494444 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
PTP4A2-207ENST00000494444 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
PTP4A2-207ENST00000494444 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
PTP4A2-207ENST00000494444 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
PTP4A2-207ENST00000494444 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
PTP4A2-207ENST00000494444 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
PTP4A2-207ENST00000494444 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
PTP4A2-207ENST00000494444 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
PTP4A2-207ENST00000494444 KCNA4P22459 653 aa15.77■□□□□ 0.12
PTP4A2-207ENST00000494444 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
PTP4A2-207ENST00000494444 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
PTP4A2-207ENST00000494444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTP4A2-207ENST00000494444 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
PTP4A2-207ENST00000494444 DSG3P32926 999 aa15□□□□□ -0.01
PTP4A2-207ENST00000494444 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
PTP4A2-207ENST00000494444 CAPN15O75808 1086 aa14.99□□□□□ -0.01
PTP4A2-207ENST00000494444 POTEHQ6S545 545 aa14.99□□□□□ -0.01
PTP4A2-207ENST00000494444 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
PTP4A2-207ENST00000494444 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
PTP4A2-207ENST00000494444 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
PTP4A2-207ENST00000494444 ABCB7O75027 752 aa14.61□□□□□ -0.07
PTP4A2-207ENST00000494444 APLP2Q06481 763 aa14.6□□□□□ -0.07
PTP4A2-207ENST00000494444 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
PTP4A2-207ENST00000494444 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
PTP4A2-207ENST00000494444 ZBTB22O15209 634 aa14.51□□□□□ -0.09
PTP4A2-207ENST00000494444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
PTP4A2-207ENST00000494444 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
PTP4A2-207ENST00000494444 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
PTP4A2-207ENST00000494444 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
PTP4A2-207ENST00000494444 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
PTP4A2-207ENST00000494444 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
PTP4A2-207ENST00000494444 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
PTP4A2-207ENST00000494444 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
PTP4A2-207ENST00000494444 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
PTP4A2-207ENST00000494444 POLA2Q14181 598 aa14.16□□□□□ -0.14
PTP4A2-207ENST00000494444 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
PTP4A2-207ENST00000494444 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
PTP4A2-207ENST00000494444 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
PTP4A2-207ENST00000494444 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
PTP4A2-207ENST00000494444 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
PTP4A2-207ENST00000494444 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
PTP4A2-207ENST00000494444 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
PTP4A2-207ENST00000494444 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
PTP4A2-207ENST00000494444 HAX1O00165 279 aa13.61□□□□□ -0.23
PTP4A2-207ENST00000494444 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTP4A2-207ENST00000494444 FBLN2P98095 1184 aa13.54□□□□□ -0.24
PTP4A2-207ENST00000494444 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
PTP4A2-207ENST00000494444 EVX2Q03828 476 aa13.42□□□□□ -0.26
PTP4A2-207ENST00000494444 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
PTP4A2-207ENST00000494444 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
PTP4A2-207ENST00000494444 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
PTP4A2-207ENST00000494444 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
PTP4A2-207ENST00000494444 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
PTP4A2-207ENST00000494444 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
PTP4A2-207ENST00000494444 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
PTP4A2-207ENST00000494444 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
PTP4A2-207ENST00000494444 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
PTP4A2-207ENST00000494444 GABBR2O75899 941 aa13.09□□□□□ -0.31
PTP4A2-207ENST00000494444 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTP4A2-207ENST00000494444 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
PTP4A2-207ENST00000494444 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
PTP4A2-207ENST00000494444 LHX8Q68G74 356 aa13□□□□□ -0.33
PTP4A2-207ENST00000494444 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
PTP4A2-207ENST00000494444 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-207ENST00000494444 FKBP8Q14318 412 aa12.82□□□□□ -0.36
PTP4A2-207ENST00000494444 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
PTP4A2-207ENST00000494444 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
PTP4A2-207ENST00000494444 PROM2Q8N271 834 aa12.77□□□□□ -0.37
PTP4A2-207ENST00000494444 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
PTP4A2-207ENST00000494444 CLCN6P51797 869 aa12.73□□□□□ -0.37
PTP4A2-207ENST00000494444 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
PTP4A2-207ENST00000494444 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
PTP4A2-207ENST00000494444 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
PTP4A2-207ENST00000494444 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
PTP4A2-207ENST00000494444 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
PTP4A2-207ENST00000494444 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
PTP4A2-207ENST00000494444 MIER1Q8N108 512 aa12.45□□□□□ -0.42
PTP4A2-207ENST00000494444 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
PTP4A2-207ENST00000494444 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
PTP4A2-207ENST00000494444 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
PTP4A2-207ENST00000494444 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
PTP4A2-207ENST00000494444 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
PTP4A2-207ENST00000494444 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
PTP4A2-207ENST00000494444 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
PTP4A2-207ENST00000494444 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms