RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 AEBP2Q6ZN18 517 aaPredicted RBP38.36■■■■□ 3.73
HMGB3P14-201ENST00000494195 CHIC1Q5VXU3 224 aa37.59■■■■□ 3.61
HMGB3P14-201ENST00000494195 PHF23Q9BUL5 403 aaPredicted RBP33.05■■■□□ 2.88
HMGB3P14-201ENST00000494195 SENP3Q9H4L4 574 aaPredicted RBP32.58■■■□□ 2.81
HMGB3P14-201ENST00000494195 PLPPR3Q6T4P5 718 aa30.58■■■□□ 2.49
HMGB3P14-201ENST00000494195 FOXD1Q16676 465 aa30.19■■■□□ 2.42
HMGB3P14-201ENST00000494195 PPP6R1Q9UPN7 881 aa29.11■■■□□ 2.25
HMGB3P14-201ENST00000494195 ADRA2BP18089 450 aa29.1■■■□□ 2.25
HMGB3P14-201ENST00000494195 PIAS4Q8N2W9 510 aaPredicted RBP28.51■■■□□ 2.15
HMGB3P14-201ENST00000494195 MSH5O43196 834 aa27.84■■■□□ 2.05
HMGB3P14-201ENST00000494195 PPP4R3CPQ6ZMV5 832 aa26.95■■□□□ 1.9
HMGB3P14-201ENST00000494195 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
HMGB3P14-201ENST00000494195 KCNA4P22459 653 aa26.43■■□□□ 1.82
HMGB3P14-201ENST00000494195 MAPK8IP2Q13387 824 aaPredicted RBP26.36■■□□□ 1.81
HMGB3P14-201ENST00000494195 NCBP3Q53F19 620 aaKnown RBP26.3■■□□□ 1.8
HMGB3P14-201ENST00000494195 CNKSR2Q8WXI2 1034 aa26.18■■□□□ 1.78
HMGB3P14-201ENST00000494195 DMRT2Q9Y5R5 561 aa26.02■■□□□ 1.76
HMGB3P14-201ENST00000494195 NPM3O75607 178 aaKnown RBP25.89■■□□□ 1.74
HMGB3P14-201ENST00000494195 RNF216Q9NWF9 866 aaPredicted RBP25.65■■□□□ 1.7
HMGB3P14-201ENST00000494195 HOXD11P31277 338 aaPredicted RBP25.52■■□□□ 1.68
HMGB3P14-201ENST00000494195 SLC4A1APQ9BWU0 796 aaKnown RBP25.19■■□□□ 1.62
HMGB3P14-201ENST00000494195 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
HMGB3P14-201ENST00000494195 POTEDQ86YR6 584 aa25.15■■□□□ 1.62
HMGB3P14-201ENST00000494195 DCAF8L1A6NGE4 600 aa24.86■■□□□ 1.57
HMGB3P14-201ENST00000494195 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
HMGB3P14-201ENST00000494195 SLC4A2P04920 1241 aa24.41■■□□□ 1.5
HMGB3P14-201ENST00000494195 FOXD4L1Q9NU39 408 aa24.32■■□□□ 1.48
HMGB3P14-201ENST00000494195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.31■■□□□ 1.48
HMGB3P14-201ENST00000494195 ZBTB22O15209 634 aa24.3■■□□□ 1.48
HMGB3P14-201ENST00000494195 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
HMGB3P14-201ENST00000494195 MYCNP04198 464 aaPredicted RBP23.94■■□□□ 1.42
HMGB3P14-201ENST00000494195 U3KPZ7 1027 aaPredicted RBP23.93■■□□□ 1.42
HMGB3P14-201ENST00000494195 RNF39Q9H2S5 420 aa23.85■■□□□ 1.41
HMGB3P14-201ENST00000494195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
HMGB3P14-201ENST00000494195 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
HMGB3P14-201ENST00000494195 SAMD1Q6SPF0 538 aaPredicted RBP23.61■■□□□ 1.37
HMGB3P14-201ENST00000494195 C1QBPQ07021 282 aaKnown RBP23.59■■□□□ 1.37
HMGB3P14-201ENST00000494195 ATXN8OSP0DMR3 200 aa23.48■■□□□ 1.35
HMGB3P14-201ENST00000494195 APLP2Q06481 763 aa23.44■■□□□ 1.34
HMGB3P14-201ENST00000494195 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
HMGB3P14-201ENST00000494195 SPINK5Q9NQ38 1064 aaPredicted RBP23.21■■□□□ 1.31
HMGB3P14-201ENST00000494195 CACNB1Q02641 598 aaPredicted RBP23.15■■□□□ 1.3
HMGB3P14-201ENST00000494195 CAPN15O75808 1086 aa23.13■■□□□ 1.29
HMGB3P14-201ENST00000494195 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
HMGB3P14-201ENST00000494195 TRHP20396 242 aaPredicted RBP23.04■■□□□ 1.28
HMGB3P14-201ENST00000494195 DSG3P32926 999 aa22.72■■□□□ 1.23
HMGB3P14-201ENST00000494195 ABCB7O75027 752 aa22.69■■□□□ 1.22
HMGB3P14-201ENST00000494195 POLA2Q14181 598 aa22.69■■□□□ 1.22
HMGB3P14-201ENST00000494195 ZBTB12Q9Y330 459 aaPredicted RBP22.37■■□□□ 1.17
HMGB3P14-201ENST00000494195 FBLN2P98095 1184 aa22.32■■□□□ 1.16
HMGB3P14-201ENST00000494195 MKRN4PQ13434 485 aaPredicted RBP22.26■■□□□ 1.15
HMGB3P14-201ENST00000494195 FKBP8Q14318 412 aa21.93■■□□□ 1.1
HMGB3P14-201ENST00000494195 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
HMGB3P14-201ENST00000494195 SPDYE4A6NLX3 237 aa21.82■■□□□ 1.08
HMGB3P14-201ENST00000494195 SPDYE2BA6NHP3 402 aa21.76■■□□□ 1.07
HMGB3P14-201ENST00000494195 SPDYE6P0CI01 402 aa21.76■■□□□ 1.07
HMGB3P14-201ENST00000494195 SPDYE2Q495Y8 402 aa21.76■■□□□ 1.07
HMGB3P14-201ENST00000494195 RBM42Q9BTD8 480 aaKnown RBP21.68■■□□□ 1.06
HMGB3P14-201ENST00000494195 ZNF692Q9BU19 519 aaPredicted RBP21.67■■□□□ 1.06
HMGB3P14-201ENST00000494195 SSUH2Q9Y2M2 353 aa21.6■■□□□ 1.05
HMGB3P14-201ENST00000494195 PROM2Q8N271 834 aa21.49■■□□□ 1.03
HMGB3P14-201ENST00000494195 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
HMGB3P14-201ENST00000494195 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
HMGB3P14-201ENST00000494195 REM2Q8IYK8 340 aaPredicted RBP21.2■□□□□ 0.98
HMGB3P14-201ENST00000494195 FBXO3Q9UK99 471 aa21.16■□□□□ 0.98
HMGB3P14-201ENST00000494195 SPDYE1Q8NFV5 336 aaPredicted RBP21.1■□□□□ 0.97
HMGB3P14-201ENST00000494195 STAG3Q9UJ98 1225 aa21.09■□□□□ 0.97
HMGB3P14-201ENST00000494195 PITPNM1O00562 1244 aa20.96■□□□□ 0.95
HMGB3P14-201ENST00000494195 CLEC11AQ9Y240 323 aa20.96■□□□□ 0.95
HMGB3P14-201ENST00000494195 VASPP50552 380 aaPredicted RBP20.85■□□□□ 0.93
HMGB3P14-201ENST00000494195 PRR29P0C7W0 189 aa20.8■□□□□ 0.92
HMGB3P14-201ENST00000494195 CHRDL2Q6WN34 429 aa20.71■□□□□ 0.91
HMGB3P14-201ENST00000494195 MIER1Q8N108 512 aa20.68■□□□□ 0.9
HMGB3P14-201ENST00000494195 PLCD3Q8N3E9 789 aa20.66■□□□□ 0.9
HMGB3P14-201ENST00000494195 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
HMGB3P14-201ENST00000494195 CREBZFQ9NS37 354 aa20.56■□□□□ 0.88
HMGB3P14-201ENST00000494195 FXR2P51116 673 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMGB3P14-201ENST00000494195 IFNLR1Q8IU57 520 aaPredicted RBP20.55■□□□□ 0.88
HMGB3P14-201ENST00000494195 PIP4P2Q8N4L2 257 aa20.47■□□□□ 0.87
HMGB3P14-201ENST00000494195 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
HMGB3P14-201ENST00000494195 KLHL34Q8N239 644 aa20.46■□□□□ 0.87
HMGB3P14-201ENST00000494195 PRKAR2AP13861 404 aaKnown RBP20.43■□□□□ 0.86
HMGB3P14-201ENST00000494195 CHADLQ6NUI6 762 aa20.43■□□□□ 0.86
HMGB3P14-201ENST00000494195 MNX1P50219 401 aaPredicted RBP20.36■□□□□ 0.85
HMGB3P14-201ENST00000494195 SPOCK2Q92563 424 aa20.31■□□□□ 0.84
HMGB3P14-201ENST00000494195 FARP1Q9Y4F1 1045 aaPredicted RBP20.28■□□□□ 0.84
HMGB3P14-201ENST00000494195 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
HMGB3P14-201ENST00000494195 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
HMGB3P14-201ENST00000494195 NUBP1P53384 320 aa20.14■□□□□ 0.81
HMGB3P14-201ENST00000494195 RTN4Q9NQC3 1192 aaKnown RBP20.08■□□□□ 0.81
HMGB3P14-201ENST00000494195 RASEFQ8IZ41 740 aa20.03■□□□□ 0.8
HMGB3P14-201ENST00000494195 FAM212AQ96EL1 285 aa20■□□□□ 0.79
HMGB3P14-201ENST00000494195 CIZ1Q9ULV3 898 aaPredicted RBP19.97■□□□□ 0.79
HMGB3P14-201ENST00000494195 GSE1Q14687 1217 aa19.96■□□□□ 0.79
HMGB3P14-201ENST00000494195 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
HMGB3P14-201ENST00000494195 POTEHQ6S545 545 aa19.94■□□□□ 0.78
HMGB3P14-201ENST00000494195 PKD2Q13563 968 aa19.9■□□□□ 0.78
HMGB3P14-201ENST00000494195 TSPYL2Q9H2G4 693 aaPredicted RBP19.89■□□□□ 0.77
HMGB3P14-201ENST00000494195 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
HMGB3P14-201ENST00000494195 CD44P16070 742 aaKnown RBP19.86■□□□□ 0.77
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