RNA–Protein interactions for RNA: ENST00000494133.1

ZNF248-207, Transcript of zinc finger protein 248, humanhuman

TSL 5

Gene ZNF248, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-207ENST00000494133 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
ZNF248-207ENST00000494133 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
ZNF248-207ENST00000494133 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
ZNF248-207ENST00000494133 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
ZNF248-207ENST00000494133 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
ZNF248-207ENST00000494133 FOXD1Q16676 465 aa22.42■■□□□ 1.18
ZNF248-207ENST00000494133 ADRA2BP18089 450 aa21.52■■□□□ 1.04
ZNF248-207ENST00000494133 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
ZNF248-207ENST00000494133 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
ZNF248-207ENST00000494133 MSH5O43196 834 aa20.75■□□□□ 0.91
ZNF248-207ENST00000494133 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
ZNF248-207ENST00000494133 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
ZNF248-207ENST00000494133 MAPK8IP2Q13387 824 aaPredicted RBP19.54■□□□□ 0.72
ZNF248-207ENST00000494133 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
ZNF248-207ENST00000494133 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
ZNF248-207ENST00000494133 KCNA4P22459 653 aa19.28■□□□□ 0.68
ZNF248-207ENST00000494133 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.68
ZNF248-207ENST00000494133 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
ZNF248-207ENST00000494133 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
ZNF248-207ENST00000494133 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
ZNF248-207ENST00000494133 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
ZNF248-207ENST00000494133 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
ZNF248-207ENST00000494133 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
ZNF248-207ENST00000494133 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
ZNF248-207ENST00000494133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
ZNF248-207ENST00000494133 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
ZNF248-207ENST00000494133 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
ZNF248-207ENST00000494133 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
ZNF248-207ENST00000494133 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
ZNF248-207ENST00000494133 ZBTB22O15209 634 aa17.7■□□□□ 0.42
ZNF248-207ENST00000494133 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
ZNF248-207ENST00000494133 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
ZNF248-207ENST00000494133 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
ZNF248-207ENST00000494133 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
ZNF248-207ENST00000494133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
ZNF248-207ENST00000494133 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
ZNF248-207ENST00000494133 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
ZNF248-207ENST00000494133 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
ZNF248-207ENST00000494133 APLP2Q06481 763 aa17.34■□□□□ 0.37
ZNF248-207ENST00000494133 CAPN15O75808 1086 aa17.2■□□□□ 0.34
ZNF248-207ENST00000494133 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
ZNF248-207ENST00000494133 ATXN8OSP0DMR3 200 aa17.15■□□□□ 0.34
ZNF248-207ENST00000494133 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
ZNF248-207ENST00000494133 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
ZNF248-207ENST00000494133 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
ZNF248-207ENST00000494133 DSG3P32926 999 aa16.86■□□□□ 0.29
ZNF248-207ENST00000494133 ABCB7O75027 752 aa16.85■□□□□ 0.29
ZNF248-207ENST00000494133 POLA2Q14181 598 aa16.78■□□□□ 0.28
ZNF248-207ENST00000494133 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
ZNF248-207ENST00000494133 FBLN2P98095 1184 aa16.45■□□□□ 0.22
ZNF248-207ENST00000494133 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
ZNF248-207ENST00000494133 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
ZNF248-207ENST00000494133 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
ZNF248-207ENST00000494133 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
ZNF248-207ENST00000494133 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
ZNF248-207ENST00000494133 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
ZNF248-207ENST00000494133 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
ZNF248-207ENST00000494133 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
ZNF248-207ENST00000494133 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
ZNF248-207ENST00000494133 FKBP8Q14318 412 aa15.95■□□□□ 0.14
ZNF248-207ENST00000494133 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
ZNF248-207ENST00000494133 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
ZNF248-207ENST00000494133 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
ZNF248-207ENST00000494133 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
ZNF248-207ENST00000494133 PROM2Q8N271 834 aa15.62■□□□□ 0.09
ZNF248-207ENST00000494133 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
ZNF248-207ENST00000494133 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
ZNF248-207ENST00000494133 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
ZNF248-207ENST00000494133 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
ZNF248-207ENST00000494133 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
ZNF248-207ENST00000494133 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
ZNF248-207ENST00000494133 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
ZNF248-207ENST00000494133 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
ZNF248-207ENST00000494133 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
ZNF248-207ENST00000494133 MIER1Q8N108 512 aa15.2■□□□□ 0.02
ZNF248-207ENST00000494133 PLCD3Q8N3E9 789 aa15.19■□□□□ 0.02
ZNF248-207ENST00000494133 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
ZNF248-207ENST00000494133 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
ZNF248-207ENST00000494133 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
ZNF248-207ENST00000494133 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
ZNF248-207ENST00000494133 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
ZNF248-207ENST00000494133 POTEHQ6S545 545 aa15.04■□□□□ -0
ZNF248-207ENST00000494133 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
ZNF248-207ENST00000494133 KLHL34Q8N239 644 aa15□□□□□ -0.01
ZNF248-207ENST00000494133 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
ZNF248-207ENST00000494133 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
ZNF248-207ENST00000494133 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
ZNF248-207ENST00000494133 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
ZNF248-207ENST00000494133 HAX1O00165 279 aa14.82□□□□□ -0.04
ZNF248-207ENST00000494133 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
ZNF248-207ENST00000494133 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
ZNF248-207ENST00000494133 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
ZNF248-207ENST00000494133 NUBP1P53384 320 aa14.74□□□□□ -0.05
ZNF248-207ENST00000494133 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
ZNF248-207ENST00000494133 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
ZNF248-207ENST00000494133 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
ZNF248-207ENST00000494133 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
ZNF248-207ENST00000494133 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
ZNF248-207ENST00000494133 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
ZNF248-207ENST00000494133 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms