RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
SORT1-207ENST00000493736 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
SORT1-207ENST00000493736 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
SORT1-207ENST00000493736 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
SORT1-207ENST00000493736 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SORT1-207ENST00000493736 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
SORT1-207ENST00000493736 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
SORT1-207ENST00000493736 ADRA2BP18089 450 aa20.33■□□□□ 0.85
SORT1-207ENST00000493736 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
SORT1-207ENST00000493736 MSH5O43196 834 aa19.93■□□□□ 0.78
SORT1-207ENST00000493736 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
SORT1-207ENST00000493736 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
SORT1-207ENST00000493736 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
SORT1-207ENST00000493736 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
SORT1-207ENST00000493736 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
SORT1-207ENST00000493736 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
SORT1-207ENST00000493736 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
SORT1-207ENST00000493736 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
SORT1-207ENST00000493736 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
SORT1-207ENST00000493736 KCNA4P22459 653 aa17.75■□□□□ 0.43
SORT1-207ENST00000493736 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
SORT1-207ENST00000493736 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
SORT1-207ENST00000493736 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
SORT1-207ENST00000493736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.322e-10■■■□□ 17.2
SORT1-207ENST00000493736 RNF39Q9H2S5 420 aa17■□□□□ 0.31
SORT1-207ENST00000493736 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
SORT1-207ENST00000493736 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
SORT1-207ENST00000493736 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
SORT1-207ENST00000493736 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
SORT1-207ENST00000493736 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
SORT1-207ENST00000493736 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
SORT1-207ENST00000493736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
SORT1-207ENST00000493736 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
SORT1-207ENST00000493736 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
SORT1-207ENST00000493736 APLP2Q06481 763 aa16.35■□□□□ 0.21
SORT1-207ENST00000493736 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
SORT1-207ENST00000493736 CAPN15O75808 1086 aa16.33■□□□□ 0.2
SORT1-207ENST00000493736 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
SORT1-207ENST00000493736 ZBTB22O15209 634 aa16.29■□□□□ 0.2
SORT1-207ENST00000493736 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
SORT1-207ENST00000493736 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
SORT1-207ENST00000493736 DSG3P32926 999 aa16.08■□□□□ 0.16
SORT1-207ENST00000493736 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
SORT1-207ENST00000493736 ABCB7O75027 752 aa15.97■□□□□ 0.15
SORT1-207ENST00000493736 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
SORT1-207ENST00000493736 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
SORT1-207ENST00000493736 ATXN8OSP0DMR3 200 aa15.9■□□□□ 0.14
SORT1-207ENST00000493736 POLA2Q14181 598 aa15.81■□□□□ 0.12
SORT1-207ENST00000493736 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
SORT1-207ENST00000493736 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
SORT1-207ENST00000493736 FBLN2P98095 1184 aa15.37■□□□□ 0.05
SORT1-207ENST00000493736 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SORT1-207ENST00000493736 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SORT1-207ENST00000493736 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
SORT1-207ENST00000493736 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
SORT1-207ENST00000493736 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
SORT1-207ENST00000493736 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
SORT1-207ENST00000493736 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
SORT1-207ENST00000493736 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
SORT1-207ENST00000493736 SSUH2Q9Y2M2 353 aa14.9□□□□□ -0.02
SORT1-207ENST00000493736 CHRDL2Q6WN34 429 aa14.84□□□□□ -0.03
SORT1-207ENST00000493736 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
SORT1-207ENST00000493736 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
SORT1-207ENST00000493736 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
SORT1-207ENST00000493736 POTEHQ6S545 545 aa14.75□□□□□ -0.05
SORT1-207ENST00000493736 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
SORT1-207ENST00000493736 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
SORT1-207ENST00000493736 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
SORT1-207ENST00000493736 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
SORT1-207ENST00000493736 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
SORT1-207ENST00000493736 FKBP8Q14318 412 aa14.49□□□□□ -0.09
SORT1-207ENST00000493736 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
SORT1-207ENST00000493736 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
SORT1-207ENST00000493736 PROM2Q8N271 834 aa14.42□□□□□ -0.1
SORT1-207ENST00000493736 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
SORT1-207ENST00000493736 HAX1O00165 279 aa14.23□□□□□ -0.13
SORT1-207ENST00000493736 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
SORT1-207ENST00000493736 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
SORT1-207ENST00000493736 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
SORT1-207ENST00000493736 MIER1Q8N108 512 aa14.08□□□□□ -0.16
SORT1-207ENST00000493736 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
SORT1-207ENST00000493736 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
SORT1-207ENST00000493736 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
SORT1-207ENST00000493736 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
SORT1-207ENST00000493736 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
SORT1-207ENST00000493736 EVX2Q03828 476 aa14.01□□□□□ -0.17
SORT1-207ENST00000493736 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
SORT1-207ENST00000493736 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
SORT1-207ENST00000493736 ZBTB47Q9UFB7 747 aaPredicted RBP13.9□□□□□ -0.18
SORT1-207ENST00000493736 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
SORT1-207ENST00000493736 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
SORT1-207ENST00000493736 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
SORT1-207ENST00000493736 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
SORT1-207ENST00000493736 GABBR2O75899 941 aa13.77□□□□□ -0.21
SORT1-207ENST00000493736 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
SORT1-207ENST00000493736 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
SORT1-207ENST00000493736 CLCN6P51797 869 aa13.72□□□□□ -0.21
SORT1-207ENST00000493736 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
SORT1-207ENST00000493736 NUBP1P53384 320 aa13.69□□□□□ -0.22
SORT1-207ENST00000493736 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms