RNA–Protein interactions for RNA: ENST00000493547.6

PGAP2-225, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3 BASIC

Gene PGAP2, Length 1,772 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-225ENST00000493547 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
PGAP2-225ENST00000493547 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
PGAP2-225ENST00000493547 ABCC9O60706 1549 aa19.6■□□□□ 0.73
PGAP2-225ENST00000493547 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
PGAP2-225ENST00000493547 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
PGAP2-225ENST00000493547 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
PGAP2-225ENST00000493547 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
PGAP2-225ENST00000493547 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
PGAP2-225ENST00000493547 NACADO15069 1562 aa18.74■□□□□ 0.59
PGAP2-225ENST00000493547 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
PGAP2-225ENST00000493547 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
PGAP2-225ENST00000493547 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
PGAP2-225ENST00000493547 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
PGAP2-225ENST00000493547 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
PGAP2-225ENST00000493547 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
PGAP2-225ENST00000493547 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
PGAP2-225ENST00000493547 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
PGAP2-225ENST00000493547 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
PGAP2-225ENST00000493547 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
PGAP2-225ENST00000493547 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
PGAP2-225ENST00000493547 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
PGAP2-225ENST00000493547 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
PGAP2-225ENST00000493547 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
PGAP2-225ENST00000493547 WIZO95785 1651 aa17.66■□□□□ 0.42
PGAP2-225ENST00000493547 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
PGAP2-225ENST00000493547 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
PGAP2-225ENST00000493547 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
PGAP2-225ENST00000493547 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
PGAP2-225ENST00000493547 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
PGAP2-225ENST00000493547 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
PGAP2-225ENST00000493547 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
PGAP2-225ENST00000493547 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
PGAP2-225ENST00000493547 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
PGAP2-225ENST00000493547 HRCP23327 699 aa17.25■□□□□ 0.35
PGAP2-225ENST00000493547 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
PGAP2-225ENST00000493547 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
PGAP2-225ENST00000493547 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
PGAP2-225ENST00000493547 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
PGAP2-225ENST00000493547 EEA1Q15075 1411 aa17.16■□□□□ 0.34
PGAP2-225ENST00000493547 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
PGAP2-225ENST00000493547 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
PGAP2-225ENST00000493547 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.319e-6■■■■■ 50.1
PGAP2-225ENST00000493547 NESP48681 1621 aa16.96■□□□□ 0.31
PGAP2-225ENST00000493547 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
PGAP2-225ENST00000493547 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
PGAP2-225ENST00000493547 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
PGAP2-225ENST00000493547 KIF21BO75037 1637 aa16.87■□□□□ 0.29
PGAP2-225ENST00000493547 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
PGAP2-225ENST00000493547 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
PGAP2-225ENST00000493547 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
PGAP2-225ENST00000493547 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
PGAP2-225ENST00000493547 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
PGAP2-225ENST00000493547 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
PGAP2-225ENST00000493547 SOGA1O94964 1423 aa16.84■□□□□ 0.29
PGAP2-225ENST00000493547 TOP2BQ02880 1626 aa16.83■□□□□ 0.29
PGAP2-225ENST00000493547 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.29
PGAP2-225ENST00000493547 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
PGAP2-225ENST00000493547 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
PGAP2-225ENST00000493547 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.28
PGAP2-225ENST00000493547 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.27
PGAP2-225ENST00000493547 CFTRP13569 1480 aa16.75■□□□□ 0.27
PGAP2-225ENST00000493547 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
PGAP2-225ENST00000493547 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
PGAP2-225ENST00000493547 CUX2O14529 1486 aa16.68■□□□□ 0.26
PGAP2-225ENST00000493547 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
PGAP2-225ENST00000493547 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
PGAP2-225ENST00000493547 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
PGAP2-225ENST00000493547 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
PGAP2-225ENST00000493547 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
PGAP2-225ENST00000493547 CLIP1P30622 1438 aa16.58■□□□□ 0.24
PGAP2-225ENST00000493547 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
PGAP2-225ENST00000493547 CUX1P39880 1505 aa16.56■□□□□ 0.24
PGAP2-225ENST00000493547 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
PGAP2-225ENST00000493547 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
PGAP2-225ENST00000493547 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.23
PGAP2-225ENST00000493547 WDR62O43379 1518 aa16.52■□□□□ 0.23
PGAP2-225ENST00000493547 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
PGAP2-225ENST00000493547 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
PGAP2-225ENST00000493547 APLP2Q06481 763 aa16.47■□□□□ 0.23
PGAP2-225ENST00000493547 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
PGAP2-225ENST00000493547 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
PGAP2-225ENST00000493547 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
PGAP2-225ENST00000493547 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
PGAP2-225ENST00000493547 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
PGAP2-225ENST00000493547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
PGAP2-225ENST00000493547 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
PGAP2-225ENST00000493547 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
PGAP2-225ENST00000493547 CUL7Q14999 1698 aa16.27■□□□□ 0.19
PGAP2-225ENST00000493547 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
PGAP2-225ENST00000493547 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
PGAP2-225ENST00000493547 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
PGAP2-225ENST00000493547 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
PGAP2-225ENST00000493547 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
PGAP2-225ENST00000493547 IGF1RP08069 1367 aa16.22■□□□□ 0.19
PGAP2-225ENST00000493547 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.18
PGAP2-225ENST00000493547 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
PGAP2-225ENST00000493547 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
PGAP2-225ENST00000493547 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
PGAP2-225ENST00000493547 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
PGAP2-225ENST00000493547 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms