RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
TRIM11-204ENST00000493030 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
TRIM11-204ENST00000493030 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
TRIM11-204ENST00000493030 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
TRIM11-204ENST00000493030 EHMT2Q96KQ7 1210 aa22.05■■□□□ 1.12
TRIM11-204ENST00000493030 APLP2Q06481 763 aa21.51■■□□□ 1.03
TRIM11-204ENST00000493030 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
TRIM11-204ENST00000493030 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
TRIM11-204ENST00000493030 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
TRIM11-204ENST00000493030 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.96
TRIM11-204ENST00000493030 PCGF6Q9BYE7 350 aa20.99■□□□□ 0.95
TRIM11-204ENST00000493030 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
TRIM11-204ENST00000493030 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
TRIM11-204ENST00000493030 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-204ENST00000493030 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
TRIM11-204ENST00000493030 ERICH6Q7L0X2 663 aa20.6■□□□□ 0.89
TRIM11-204ENST00000493030 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
TRIM11-204ENST00000493030 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
TRIM11-204ENST00000493030 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
TRIM11-204ENST00000493030 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
TRIM11-204ENST00000493030 NEFLP07196 543 aa20.29■□□□□ 0.84
TRIM11-204ENST00000493030 MYT1Q01538 1121 aa20.2■□□□□ 0.82
TRIM11-204ENST00000493030 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
TRIM11-204ENST00000493030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
TRIM11-204ENST00000493030 HNRNPUL2Q1KMD3 747 aaKnown RBP20.12■□□□□ 0.81
TRIM11-204ENST00000493030 ITGAEP38570 1179 aa20.11■□□□□ 0.81
TRIM11-204ENST00000493030 POLR3GLQ9BT43 218 aa20.05■□□□□ 0.8
TRIM11-204ENST00000493030 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
TRIM11-204ENST00000493030 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
TRIM11-204ENST00000493030 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
TRIM11-204ENST00000493030 LOC105371045A0A1W2PR82 267 aa19.84■□□□□ 0.77
TRIM11-204ENST00000493030 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
TRIM11-204ENST00000493030 HRCP23327 699 aa19.74■□□□□ 0.75
TRIM11-204ENST00000493030 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
TRIM11-204ENST00000493030 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
TRIM11-204ENST00000493030 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRIM11-204ENST00000493030 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
TRIM11-204ENST00000493030 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
TRIM11-204ENST00000493030 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
TRIM11-204ENST00000493030 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
TRIM11-204ENST00000493030 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
TRIM11-204ENST00000493030 ABCC9O60706 1549 aa19.3■□□□□ 0.68
TRIM11-204ENST00000493030 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
TRIM11-204ENST00000493030 FBLN2P98095 1184 aa19.28■□□□□ 0.68
TRIM11-204ENST00000493030 RTL5Q5HYW3 569 aaPredicted RBP19.22■□□□□ 0.67
TRIM11-204ENST00000493030 BCANQ96GW7 911 aa19.13■□□□□ 0.65
TRIM11-204ENST00000493030 ARID3CA6NKF2 412 aa19.1■□□□□ 0.65
TRIM11-204ENST00000493030 ANP32CO43423 234 aa19.08■□□□□ 0.65
TRIM11-204ENST00000493030 SLC24A1O60721 1099 aa19.08■□□□□ 0.64
TRIM11-204ENST00000493030 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
TRIM11-204ENST00000493030 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
TRIM11-204ENST00000493030 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
TRIM11-204ENST00000493030 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
TRIM11-204ENST00000493030 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
TRIM11-204ENST00000493030 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
TRIM11-204ENST00000493030 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
TRIM11-204ENST00000493030 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
TRIM11-204ENST00000493030 NEFMP07197 916 aa18.9■□□□□ 0.62
TRIM11-204ENST00000493030 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
TRIM11-204ENST00000493030 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
TRIM11-204ENST00000493030 ESF1Q9H501 851 aaKnown RBP18.75■□□□□ 0.59
TRIM11-204ENST00000493030 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
TRIM11-204ENST00000493030 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
TRIM11-204ENST00000493030 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
TRIM11-204ENST00000493030 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
TRIM11-204ENST00000493030 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
TRIM11-204ENST00000493030 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
TRIM11-204ENST00000493030 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM11-204ENST00000493030 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
TRIM11-204ENST00000493030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRIM11-204ENST00000493030 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
TRIM11-204ENST00000493030 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
TRIM11-204ENST00000493030 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.55
TRIM11-204ENST00000493030 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRIM11-204ENST00000493030 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
TRIM11-204ENST00000493030 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
TRIM11-204ENST00000493030 FKBP8Q14318 412 aa18.48■□□□□ 0.55
TRIM11-204ENST00000493030 HSP90AA1P07900 732 aaKnown RBP18.47■□□□□ 0.55
TRIM11-204ENST00000493030 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
TRIM11-204ENST00000493030 TMC1Q8TDI8 760 aa18.38■□□□□ 0.53
TRIM11-204ENST00000493030 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
TRIM11-204ENST00000493030 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
TRIM11-204ENST00000493030 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
TRIM11-204ENST00000493030 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
TRIM11-204ENST00000493030 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
TRIM11-204ENST00000493030 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.53
TRIM11-204ENST00000493030 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
TRIM11-204ENST00000493030 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIM11-204ENST00000493030 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
TRIM11-204ENST00000493030 MTUS2Q5JR59 1369 aa18.28■□□□□ 0.52
TRIM11-204ENST00000493030 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
TRIM11-204ENST00000493030 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-204ENST00000493030 NACADO15069 1562 aa18.27■□□□□ 0.52
TRIM11-204ENST00000493030 A0A0G2JS52 829 aa18.27■□□□□ 0.52
TRIM11-204ENST00000493030 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
TRIM11-204ENST00000493030 MRS2Q9HD23 443 aa18.27■□□□□ 0.52
TRIM11-204ENST00000493030 HIRIP3Q9BW71 556 aaPredicted RBP18.26■□□□□ 0.51
TRIM11-204ENST00000493030 EIF5BO60841 1220 aaKnown RBP18.24■□□□□ 0.51
TRIM11-204ENST00000493030 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
TRIM11-204ENST00000493030 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms