RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
TPR-208ENST00000492973 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
TPR-208ENST00000492973 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
TPR-208ENST00000492973 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
TPR-208ENST00000492973 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
TPR-208ENST00000492973 FOXD1Q16676 465 aa22.44■■□□□ 1.18
TPR-208ENST00000492973 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
TPR-208ENST00000492973 ADRA2BP18089 450 aa21.55■■□□□ 1.04
TPR-208ENST00000492973 PIAS4Q8N2W9 510 aaPredicted RBP21.12■□□□□ 0.97
TPR-208ENST00000492973 MSH5O43196 834 aa20.67■□□□□ 0.9
TPR-208ENST00000492973 PPP4R3CPQ6ZMV5 832 aa19.89■□□□□ 0.77
TPR-208ENST00000492973 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
TPR-208ENST00000492973 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
TPR-208ENST00000492973 KCNA4P22459 653 aa19.43■□□□□ 0.7
TPR-208ENST00000492973 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
TPR-208ENST00000492973 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
TPR-208ENST00000492973 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
TPR-208ENST00000492973 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
TPR-208ENST00000492973 RNF216Q9NWF9 866 aaPredicted RBP18.97■□□□□ 0.63
TPR-208ENST00000492973 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
TPR-208ENST00000492973 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
TPR-208ENST00000492973 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
TPR-208ENST00000492973 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
TPR-208ENST00000492973 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
TPR-208ENST00000492973 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
TPR-208ENST00000492973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.469e-9■■□□□ 12.8
TPR-208ENST00000492973 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
TPR-208ENST00000492973 ZBTB22O15209 634 aa17.91■□□□□ 0.46
TPR-208ENST00000492973 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
TPR-208ENST00000492973 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
TPR-208ENST00000492973 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
TPR-208ENST00000492973 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
TPR-208ENST00000492973 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
TPR-208ENST00000492973 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
TPR-208ENST00000492973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
TPR-208ENST00000492973 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
TPR-208ENST00000492973 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
TPR-208ENST00000492973 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
TPR-208ENST00000492973 APLP2Q06481 763 aa17.26■□□□□ 0.35
TPR-208ENST00000492973 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
TPR-208ENST00000492973 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
TPR-208ENST00000492973 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
TPR-208ENST00000492973 CAPN15O75808 1086 aa17.1■□□□□ 0.33
TPR-208ENST00000492973 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
TPR-208ENST00000492973 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
TPR-208ENST00000492973 DSG3P32926 999 aa16.87■□□□□ 0.29
TPR-208ENST00000492973 ABCB7O75027 752 aa16.78■□□□□ 0.28
TPR-208ENST00000492973 POLA2Q14181 598 aa16.76■□□□□ 0.27
TPR-208ENST00000492973 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
TPR-208ENST00000492973 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
TPR-208ENST00000492973 FBLN2P98095 1184 aa16.41■□□□□ 0.22
TPR-208ENST00000492973 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
TPR-208ENST00000492973 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
TPR-208ENST00000492973 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
TPR-208ENST00000492973 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
TPR-208ENST00000492973 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
TPR-208ENST00000492973 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
TPR-208ENST00000492973 FKBP8Q14318 412 aa16.04■□□□□ 0.16
TPR-208ENST00000492973 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
TPR-208ENST00000492973 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
TPR-208ENST00000492973 SSUH2Q9Y2M2 353 aa15.97■□□□□ 0.15
TPR-208ENST00000492973 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
TPR-208ENST00000492973 PROM2Q8N271 834 aa15.84■□□□□ 0.13
TPR-208ENST00000492973 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
TPR-208ENST00000492973 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
TPR-208ENST00000492973 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
TPR-208ENST00000492973 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
TPR-208ENST00000492973 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
TPR-208ENST00000492973 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
TPR-208ENST00000492973 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
TPR-208ENST00000492973 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
TPR-208ENST00000492973 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
TPR-208ENST00000492973 VASPP50552 380 aaPredicted RBP15.28■□□□□ 0.04
TPR-208ENST00000492973 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.034e-8■■■■□ 23.6
TPR-208ENST00000492973 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
TPR-208ENST00000492973 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
TPR-208ENST00000492973 MIER1Q8N108 512 aa15.17■□□□□ 0.02
TPR-208ENST00000492973 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
TPR-208ENST00000492973 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
TPR-208ENST00000492973 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
TPR-208ENST00000492973 IFNLR1Q8IU57 520 aaPredicted RBP15.08■□□□□ 0
TPR-208ENST00000492973 PLEKHG5O94827 1062 aa15.07■□□□□ 0
TPR-208ENST00000492973 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
TPR-208ENST00000492973 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
TPR-208ENST00000492973 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
TPR-208ENST00000492973 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
TPR-208ENST00000492973 POTEHQ6S545 545 aa14.91□□□□□ -0.02
TPR-208ENST00000492973 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
TPR-208ENST00000492973 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
TPR-208ENST00000492973 NUBP1P53384 320 aa14.85□□□□□ -0.03
TPR-208ENST00000492973 RASEFQ8IZ41 740 aa14.77□□□□□ -0.05
TPR-208ENST00000492973 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
TPR-208ENST00000492973 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
TPR-208ENST00000492973 FAM212AQ96EL1 285 aa14.69□□□□□ -0.06
TPR-208ENST00000492973 HAX1O00165 279 aa14.67□□□□□ -0.06
TPR-208ENST00000492973 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
TPR-208ENST00000492973 GSE1Q14687 1217 aa14.64□□□□□ -0.07
TPR-208ENST00000492973 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
TPR-208ENST00000492973 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
TPR-208ENST00000492973 AMER1Q5JTC6 1135 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms