RNA–Protein interactions for RNA: ENST00000492139.5

PDCD10-215, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-215ENST00000492139 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
PDCD10-215ENST00000492139 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
PDCD10-215ENST00000492139 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
PDCD10-215ENST00000492139 PHF23Q9BUL5 403 aaPredicted RBP26.47■■□□□ 1.83
PDCD10-215ENST00000492139 FOXD1Q16676 465 aa24.97■■□□□ 1.59
PDCD10-215ENST00000492139 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
PDCD10-215ENST00000492139 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
PDCD10-215ENST00000492139 ADRA2BP18089 450 aa23.37■■□□□ 1.33
PDCD10-215ENST00000492139 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
PDCD10-215ENST00000492139 MSH5O43196 834 aa23.33■■□□□ 1.33
PDCD10-215ENST00000492139 POTEDQ86YR6 584 aa22.49■■□□□ 1.19
PDCD10-215ENST00000492139 MAPK8IP2Q13387 824 aaPredicted RBP21.41■■□□□ 1.02
PDCD10-215ENST00000492139 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
PDCD10-215ENST00000492139 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
PDCD10-215ENST00000492139 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
PDCD10-215ENST00000492139 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
PDCD10-215ENST00000492139 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
PDCD10-215ENST00000492139 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
PDCD10-215ENST00000492139 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
PDCD10-215ENST00000492139 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
PDCD10-215ENST00000492139 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
PDCD10-215ENST00000492139 RNF39Q9H2S5 420 aa19.92■□□□□ 0.78
PDCD10-215ENST00000492139 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
PDCD10-215ENST00000492139 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
PDCD10-215ENST00000492139 KCNA4P22459 653 aa19.8■□□□□ 0.76
PDCD10-215ENST00000492139 C1QBPQ07021 282 aaKnown RBP19.63■□□□□ 0.73
PDCD10-215ENST00000492139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDCD10-215ENST00000492139 U3KPZ7 1027 aaPredicted RBP19.21■□□□□ 0.67
PDCD10-215ENST00000492139 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
PDCD10-215ENST00000492139 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
PDCD10-215ENST00000492139 CAPN15O75808 1086 aa18.81■□□□□ 0.6
PDCD10-215ENST00000492139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
PDCD10-215ENST00000492139 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
PDCD10-215ENST00000492139 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
PDCD10-215ENST00000492139 DSG3P32926 999 aa18.7■□□□□ 0.58
PDCD10-215ENST00000492139 APLP2Q06481 763 aa18.69■□□□□ 0.58
PDCD10-215ENST00000492139 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
PDCD10-215ENST00000492139 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
PDCD10-215ENST00000492139 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
PDCD10-215ENST00000492139 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
PDCD10-215ENST00000492139 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
PDCD10-215ENST00000492139 ABCB7O75027 752 aa18.39■□□□□ 0.53
PDCD10-215ENST00000492139 ZBTB22O15209 634 aa18.22■□□□□ 0.51
PDCD10-215ENST00000492139 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
PDCD10-215ENST00000492139 POLA2Q14181 598 aa18.09■□□□□ 0.49
PDCD10-215ENST00000492139 ATXN8OSP0DMR3 200 aa17.87■□□□□ 0.45
PDCD10-215ENST00000492139 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
PDCD10-215ENST00000492139 ZBTB12Q9Y330 459 aaPredicted RBP17.77■□□□□ 0.44
PDCD10-215ENST00000492139 POTEHQ6S545 545 aa17.65■□□□□ 0.42
PDCD10-215ENST00000492139 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
PDCD10-215ENST00000492139 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
PDCD10-215ENST00000492139 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
PDCD10-215ENST00000492139 FBLN2P98095 1184 aa17.38■□□□□ 0.37
PDCD10-215ENST00000492139 CHRDL2Q6WN34 429 aa17.38■□□□□ 0.37
PDCD10-215ENST00000492139 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
PDCD10-215ENST00000492139 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
PDCD10-215ENST00000492139 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
PDCD10-215ENST00000492139 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
PDCD10-215ENST00000492139 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
PDCD10-215ENST00000492139 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
PDCD10-215ENST00000492139 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
PDCD10-215ENST00000492139 SSUH2Q9Y2M2 353 aa17.04■□□□□ 0.32
PDCD10-215ENST00000492139 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
PDCD10-215ENST00000492139 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
PDCD10-215ENST00000492139 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDCD10-215ENST00000492139 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
PDCD10-215ENST00000492139 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
PDCD10-215ENST00000492139 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDCD10-215ENST00000492139 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
PDCD10-215ENST00000492139 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
PDCD10-215ENST00000492139 HAX1O00165 279 aa16.61■□□□□ 0.25
PDCD10-215ENST00000492139 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
PDCD10-215ENST00000492139 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
PDCD10-215ENST00000492139 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
PDCD10-215ENST00000492139 EVX2Q03828 476 aa16.44■□□□□ 0.22
PDCD10-215ENST00000492139 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
PDCD10-215ENST00000492139 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
PDCD10-215ENST00000492139 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
PDCD10-215ENST00000492139 PROM2Q8N271 834 aa16.22■□□□□ 0.19
PDCD10-215ENST00000492139 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
PDCD10-215ENST00000492139 CD44P16070 742 aaKnown RBP16.14■□□□□ 0.17
PDCD10-215ENST00000492139 GABBR2O75899 941 aa16.09■□□□□ 0.17
PDCD10-215ENST00000492139 MNX1P50219 401 aaPredicted RBP15.98■□□□□ 0.15
PDCD10-215ENST00000492139 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
PDCD10-215ENST00000492139 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
PDCD10-215ENST00000492139 CLCN6P51797 869 aa15.92■□□□□ 0.14
PDCD10-215ENST00000492139 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDCD10-215ENST00000492139 FKBP8Q14318 412 aa15.85■□□□□ 0.13
PDCD10-215ENST00000492139 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
PDCD10-215ENST00000492139 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
PDCD10-215ENST00000492139 MIER1Q8N108 512 aa15.72■□□□□ 0.11
PDCD10-215ENST00000492139 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
PDCD10-215ENST00000492139 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
PDCD10-215ENST00000492139 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
PDCD10-215ENST00000492139 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
PDCD10-215ENST00000492139 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
PDCD10-215ENST00000492139 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
PDCD10-215ENST00000492139 LHX8Q68G74 356 aa15.58■□□□□ 0.08
PDCD10-215ENST00000492139 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
PDCD10-215ENST00000492139 RASEFQ8IZ41 740 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 447 ms