RNA–Protein interactions for RNA: ENST00000491658.1

TFRC-215, Transcript of transferrin receptor, humanhuman

TSL 5

Gene TFRC, Length 396 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-215ENST00000491658 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
TFRC-215ENST00000491658 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
TFRC-215ENST00000491658 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
TFRC-215ENST00000491658 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
TFRC-215ENST00000491658 FOXD1Q16676 465 aa17.29■□□□□ 0.36
TFRC-215ENST00000491658 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
TFRC-215ENST00000491658 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
TFRC-215ENST00000491658 ADRA2BP18089 450 aa16.53■□□□□ 0.24
TFRC-215ENST00000491658 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
TFRC-215ENST00000491658 MSH5O43196 834 aa15.97■□□□□ 0.15
TFRC-215ENST00000491658 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
TFRC-215ENST00000491658 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
TFRC-215ENST00000491658 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
TFRC-215ENST00000491658 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
TFRC-215ENST00000491658 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
TFRC-215ENST00000491658 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
TFRC-215ENST00000491658 KCNA4P22459 653 aa14.75□□□□□ -0.05
TFRC-215ENST00000491658 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
TFRC-215ENST00000491658 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
TFRC-215ENST00000491658 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
TFRC-215ENST00000491658 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
TFRC-215ENST00000491658 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
TFRC-215ENST00000491658 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
TFRC-215ENST00000491658 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
TFRC-215ENST00000491658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.2
TFRC-215ENST00000491658 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
TFRC-215ENST00000491658 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
TFRC-215ENST00000491658 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
TFRC-215ENST00000491658 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
TFRC-215ENST00000491658 ZBTB22O15209 634 aa13.58□□□□□ -0.24
TFRC-215ENST00000491658 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
TFRC-215ENST00000491658 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
TFRC-215ENST00000491658 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
TFRC-215ENST00000491658 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
TFRC-215ENST00000491658 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
TFRC-215ENST00000491658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
TFRC-215ENST00000491658 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
TFRC-215ENST00000491658 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
TFRC-215ENST00000491658 APLP2Q06481 763 aa13.25□□□□□ -0.29
TFRC-215ENST00000491658 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
TFRC-215ENST00000491658 CAPN15O75808 1086 aa13.16□□□□□ -0.3
TFRC-215ENST00000491658 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
TFRC-215ENST00000491658 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
TFRC-215ENST00000491658 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
TFRC-215ENST00000491658 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
TFRC-215ENST00000491658 DSG3P32926 999 aa12.98□□□□□ -0.33
TFRC-215ENST00000491658 ABCB7O75027 752 aa12.92□□□□□ -0.34
TFRC-215ENST00000491658 POLA2Q14181 598 aa12.85□□□□□ -0.35
TFRC-215ENST00000491658 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
TFRC-215ENST00000491658 FBLN2P98095 1184 aa12.55□□□□□ -0.4
TFRC-215ENST00000491658 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
TFRC-215ENST00000491658 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
TFRC-215ENST00000491658 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
TFRC-215ENST00000491658 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
TFRC-215ENST00000491658 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
TFRC-215ENST00000491658 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
TFRC-215ENST00000491658 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
TFRC-215ENST00000491658 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
TFRC-215ENST00000491658 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
TFRC-215ENST00000491658 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
TFRC-215ENST00000491658 FKBP8Q14318 412 aa12.13□□□□□ -0.47
TFRC-215ENST00000491658 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
TFRC-215ENST00000491658 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
TFRC-215ENST00000491658 PROM2Q8N271 834 aa12.02□□□□□ -0.49
TFRC-215ENST00000491658 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
TFRC-215ENST00000491658 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
TFRC-215ENST00000491658 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
TFRC-215ENST00000491658 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
TFRC-215ENST00000491658 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
TFRC-215ENST00000491658 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
TFRC-215ENST00000491658 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
TFRC-215ENST00000491658 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
TFRC-215ENST00000491658 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
TFRC-215ENST00000491658 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
TFRC-215ENST00000491658 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
TFRC-215ENST00000491658 POTEHQ6S545 545 aa11.62□□□□□ -0.55
TFRC-215ENST00000491658 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
TFRC-215ENST00000491658 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
TFRC-215ENST00000491658 MIER1Q8N108 512 aa11.55□□□□□ -0.56
TFRC-215ENST00000491658 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
TFRC-215ENST00000491658 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
TFRC-215ENST00000491658 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
TFRC-215ENST00000491658 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
TFRC-215ENST00000491658 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
TFRC-215ENST00000491658 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
TFRC-215ENST00000491658 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
TFRC-215ENST00000491658 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
TFRC-215ENST00000491658 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
TFRC-215ENST00000491658 HAX1O00165 279 aa11.35□□□□□ -0.59
TFRC-215ENST00000491658 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
TFRC-215ENST00000491658 NUBP1P53384 320 aa11.3□□□□□ -0.6
TFRC-215ENST00000491658 EVX2Q03828 476 aa11.27□□□□□ -0.61
TFRC-215ENST00000491658 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
TFRC-215ENST00000491658 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
TFRC-215ENST00000491658 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
TFRC-215ENST00000491658 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
TFRC-215ENST00000491658 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
TFRC-215ENST00000491658 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
TFRC-215ENST00000491658 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
TFRC-215ENST00000491658 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms