RNA–Protein interactions for RNA: ENST00000491317.1

LINC00518-204, long intergenic non-protein coding RNA 518, humanhuman

TSL 2 BASIC

Gene LINC00518, Length 1,228 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00518-204ENST00000491317 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
LINC00518-204ENST00000491317 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
LINC00518-204ENST00000491317 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
LINC00518-204ENST00000491317 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
LINC00518-204ENST00000491317 FOXD1Q16676 465 aa21.7■■□□□ 1.06
LINC00518-204ENST00000491317 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
LINC00518-204ENST00000491317 ADRA2BP18089 450 aa20.67■□□□□ 0.9
LINC00518-204ENST00000491317 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
LINC00518-204ENST00000491317 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
LINC00518-204ENST00000491317 MSH5O43196 834 aa20.17■□□□□ 0.82
LINC00518-204ENST00000491317 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
LINC00518-204ENST00000491317 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
LINC00518-204ENST00000491317 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
LINC00518-204ENST00000491317 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
LINC00518-204ENST00000491317 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
LINC00518-204ENST00000491317 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
LINC00518-204ENST00000491317 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
LINC00518-204ENST00000491317 KCNA4P22459 653 aa18.14■□□□□ 0.49
LINC00518-204ENST00000491317 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
LINC00518-204ENST00000491317 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
LINC00518-204ENST00000491317 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
LINC00518-204ENST00000491317 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
LINC00518-204ENST00000491317 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
LINC00518-204ENST00000491317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC00518-204ENST00000491317 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
LINC00518-204ENST00000491317 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
LINC00518-204ENST00000491317 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
LINC00518-204ENST00000491317 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
LINC00518-204ENST00000491317 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
LINC00518-204ENST00000491317 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
LINC00518-204ENST00000491317 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
LINC00518-204ENST00000491317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
LINC00518-204ENST00000491317 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
LINC00518-204ENST00000491317 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
LINC00518-204ENST00000491317 ZBTB22O15209 634 aa16.63■□□□□ 0.25
LINC00518-204ENST00000491317 APLP2Q06481 763 aa16.62■□□□□ 0.25
LINC00518-204ENST00000491317 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
LINC00518-204ENST00000491317 CAPN15O75808 1086 aa16.59■□□□□ 0.25
LINC00518-204ENST00000491317 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
LINC00518-204ENST00000491317 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
LINC00518-204ENST00000491317 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
LINC00518-204ENST00000491317 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
LINC00518-204ENST00000491317 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
LINC00518-204ENST00000491317 DSG3P32926 999 aa16.3■□□□□ 0.2
LINC00518-204ENST00000491317 ABCB7O75027 752 aa16.23■□□□□ 0.19
LINC00518-204ENST00000491317 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
LINC00518-204ENST00000491317 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
LINC00518-204ENST00000491317 POLA2Q14181 598 aa16.08■□□□□ 0.16
LINC00518-204ENST00000491317 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
LINC00518-204ENST00000491317 FBLN2P98095 1184 aa15.66■□□□□ 0.1
LINC00518-204ENST00000491317 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
LINC00518-204ENST00000491317 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
LINC00518-204ENST00000491317 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
LINC00518-204ENST00000491317 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
LINC00518-204ENST00000491317 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
LINC00518-204ENST00000491317 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
LINC00518-204ENST00000491317 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
LINC00518-204ENST00000491317 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
LINC00518-204ENST00000491317 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
LINC00518-204ENST00000491317 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
LINC00518-204ENST00000491317 SPDYE4A6NLX3 237 aa15.09■□□□□ 0.01
LINC00518-204ENST00000491317 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
LINC00518-204ENST00000491317 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
LINC00518-204ENST00000491317 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
LINC00518-204ENST00000491317 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
LINC00518-204ENST00000491317 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
LINC00518-204ENST00000491317 POTEHQ6S545 545 aa14.87□□□□□ -0.03
LINC00518-204ENST00000491317 FKBP8Q14318 412 aa14.86□□□□□ -0.03
LINC00518-204ENST00000491317 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
LINC00518-204ENST00000491317 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
LINC00518-204ENST00000491317 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
LINC00518-204ENST00000491317 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00518-204ENST00000491317 PROM2Q8N271 834 aa14.7□□□□□ -0.06
LINC00518-204ENST00000491317 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
LINC00518-204ENST00000491317 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
LINC00518-204ENST00000491317 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
LINC00518-204ENST00000491317 HAX1O00165 279 aa14.43□□□□□ -0.1
LINC00518-204ENST00000491317 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
LINC00518-204ENST00000491317 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
LINC00518-204ENST00000491317 MIER1Q8N108 512 aa14.39□□□□□ -0.11
LINC00518-204ENST00000491317 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
LINC00518-204ENST00000491317 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
LINC00518-204ENST00000491317 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC00518-204ENST00000491317 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
LINC00518-204ENST00000491317 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
LINC00518-204ENST00000491317 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
LINC00518-204ENST00000491317 VASPP50552 380 aaPredicted RBP14.19□□□□□ -0.14
LINC00518-204ENST00000491317 EVX2Q03828 476 aa14.19□□□□□ -0.14
LINC00518-204ENST00000491317 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
LINC00518-204ENST00000491317 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
LINC00518-204ENST00000491317 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
LINC00518-204ENST00000491317 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
LINC00518-204ENST00000491317 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
LINC00518-204ENST00000491317 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
LINC00518-204ENST00000491317 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
LINC00518-204ENST00000491317 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
LINC00518-204ENST00000491317 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
LINC00518-204ENST00000491317 NUBP1P53384 320 aa13.95□□□□□ -0.18
LINC00518-204ENST00000491317 GABBR2O75899 941 aa13.94□□□□□ -0.18
LINC00518-204ENST00000491317 FAM212AQ96EL1 285 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms