RNA–Protein interactions for RNA: ENST00000490611.1

MTA3-217, Transcript of metastasis associated 1 family member 3, humanhuman

TSL 2

Gene MTA3, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA3-217ENST00000490611 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
MTA3-217ENST00000490611 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
MTA3-217ENST00000490611 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
MTA3-217ENST00000490611 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
MTA3-217ENST00000490611 FOXD1Q16676 465 aa23.53■■□□□ 1.36
MTA3-217ENST00000490611 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
MTA3-217ENST00000490611 MSH5O43196 834 aa22.36■■□□□ 1.17
MTA3-217ENST00000490611 PIAS4Q8N2W9 510 aaPredicted RBP21.89■■□□□ 1.09
MTA3-217ENST00000490611 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
MTA3-217ENST00000490611 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
MTA3-217ENST00000490611 ADRA2BP18089 450 aa21.41■■□□□ 1.02
MTA3-217ENST00000490611 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
MTA3-217ENST00000490611 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
MTA3-217ENST00000490611 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
MTA3-217ENST00000490611 CACNB1Q02641 598 aaPredicted RBP19.5■□□□□ 0.71
MTA3-217ENST00000490611 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
MTA3-217ENST00000490611 RNF39Q9H2S5 420 aa18.96■□□□□ 0.63
MTA3-217ENST00000490611 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
MTA3-217ENST00000490611 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
MTA3-217ENST00000490611 C1QBPQ07021 282 aaKnown RBP18.7■□□□□ 0.58
MTA3-217ENST00000490611 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
MTA3-217ENST00000490611 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
MTA3-217ENST00000490611 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
MTA3-217ENST00000490611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
MTA3-217ENST00000490611 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
MTA3-217ENST00000490611 POTEHQ6S545 545 aa17.72■□□□□ 0.43
MTA3-217ENST00000490611 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
MTA3-217ENST00000490611 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
MTA3-217ENST00000490611 DSG3P32926 999 aa17.54■□□□□ 0.4
MTA3-217ENST00000490611 CAPN15O75808 1086 aa17.53■□□□□ 0.4
MTA3-217ENST00000490611 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
MTA3-217ENST00000490611 APLP2Q06481 763 aa17.19■□□□□ 0.34
MTA3-217ENST00000490611 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
MTA3-217ENST00000490611 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
MTA3-217ENST00000490611 ABCB7O75027 752 aa17.03■□□□□ 0.32
MTA3-217ENST00000490611 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
MTA3-217ENST00000490611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
MTA3-217ENST00000490611 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
MTA3-217ENST00000490611 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
MTA3-217ENST00000490611 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
MTA3-217ENST00000490611 KCNA4P22459 653 aa16.79■□□□□ 0.28
MTA3-217ENST00000490611 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
MTA3-217ENST00000490611 POLA2Q14181 598 aa16.49■□□□□ 0.23
MTA3-217ENST00000490611 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
MTA3-217ENST00000490611 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
MTA3-217ENST00000490611 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
MTA3-217ENST00000490611 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
MTA3-217ENST00000490611 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
MTA3-217ENST00000490611 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
MTA3-217ENST00000490611 HAX1O00165 279 aa16■□□□□ 0.15
MTA3-217ENST00000490611 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
MTA3-217ENST00000490611 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
MTA3-217ENST00000490611 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
MTA3-217ENST00000490611 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
MTA3-217ENST00000490611 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
MTA3-217ENST00000490611 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
MTA3-217ENST00000490611 EVX2Q03828 476 aa15.65■□□□□ 0.1
MTA3-217ENST00000490611 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
MTA3-217ENST00000490611 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
MTA3-217ENST00000490611 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
MTA3-217ENST00000490611 FBLN2P98095 1184 aa15.54■□□□□ 0.08
MTA3-217ENST00000490611 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
MTA3-217ENST00000490611 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
MTA3-217ENST00000490611 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
MTA3-217ENST00000490611 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
MTA3-217ENST00000490611 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
MTA3-217ENST00000490611 ZBTB22O15209 634 aa15.38■□□□□ 0.05
MTA3-217ENST00000490611 GABBR2O75899 941 aa15.35■□□□□ 0.05
MTA3-217ENST00000490611 LHX8Q68G74 356 aa15.32■□□□□ 0.04
MTA3-217ENST00000490611 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
MTA3-217ENST00000490611 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
MTA3-217ENST00000490611 MKRN4PQ13434 485 aaPredicted RBP15.23■□□□□ 0.03
MTA3-217ENST00000490611 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
MTA3-217ENST00000490611 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
MTA3-217ENST00000490611 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
MTA3-217ENST00000490611 CLCN6P51797 869 aa15.03■□□□□ -0
MTA3-217ENST00000490611 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
MTA3-217ENST00000490611 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
MTA3-217ENST00000490611 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
MTA3-217ENST00000490611 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
MTA3-217ENST00000490611 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
MTA3-217ENST00000490611 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
MTA3-217ENST00000490611 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
MTA3-217ENST00000490611 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
MTA3-217ENST00000490611 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
MTA3-217ENST00000490611 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
MTA3-217ENST00000490611 OTUD5Q96G74 571 aa14.55□□□□□ -0.08
MTA3-217ENST00000490611 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
MTA3-217ENST00000490611 POTEMA6NI47 508 aa14.45□□□□□ -0.1
MTA3-217ENST00000490611 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
MTA3-217ENST00000490611 PHF12Q96QT6 1004 aa14.41□□□□□ -0.1
MTA3-217ENST00000490611 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
MTA3-217ENST00000490611 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
MTA3-217ENST00000490611 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
MTA3-217ENST00000490611 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
MTA3-217ENST00000490611 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
MTA3-217ENST00000490611 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
MTA3-217ENST00000490611 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
MTA3-217ENST00000490611 SLC39A7Q92504 469 aa14.27□□□□□ -0.13
MTA3-217ENST00000490611 C7P10643 843 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms