RNA–Protein interactions for RNA: ENST00000490431.2

GTF2I-210, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 252 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-210ENST00000490431 AEBP2Q6ZN18 517 aaPredicted RBP14.64□□□□□ -0.07
GTF2I-210ENST00000490431 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
GTF2I-210ENST00000490431 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
GTF2I-210ENST00000490431 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
GTF2I-210ENST00000490431 FOXD1Q16676 465 aa11.58□□□□□ -0.56
GTF2I-210ENST00000490431 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
GTF2I-210ENST00000490431 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
GTF2I-210ENST00000490431 ADRA2BP18089 450 aa10.97□□□□□ -0.65
GTF2I-210ENST00000490431 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
GTF2I-210ENST00000490431 MSH5O43196 834 aa10.71□□□□□ -0.69
GTF2I-210ENST00000490431 POTEDQ86YR6 584 aa10.15□□□□□ -0.78
GTF2I-210ENST00000490431 MAPK8IP2Q13387 824 aaPredicted RBP10.04□□□□□ -0.8
GTF2I-210ENST00000490431 SCAF1Q9H7N4 1312 aaKnown RBP10□□□□□ -0.81
GTF2I-210ENST00000490431 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
GTF2I-210ENST00000490431 DMRT2Q9Y5R5 561 aa9.88□□□□□ -0.83
GTF2I-210ENST00000490431 CNKSR2Q8WXI2 1034 aa9.72□□□□□ -0.85
GTF2I-210ENST00000490431 NCBP3Q53F19 620 aaKnown RBP9.62□□□□□ -0.87
GTF2I-210ENST00000490431 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
GTF2I-210ENST00000490431 RNF216Q9NWF9 866 aaPredicted RBP9.58□□□□□ -0.88
GTF2I-210ENST00000490431 KCNA4P22459 653 aa9.51□□□□□ -0.89
GTF2I-210ENST00000490431 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
GTF2I-210ENST00000490431 DCAF8L1A6NGE4 600 aa9.47□□□□□ -0.89
GTF2I-210ENST00000490431 DNAJC5BQ9UF47 199 aa9.24□□□□□ -0.93
GTF2I-210ENST00000490431 RNF39Q9H2S5 420 aa9.18□□□□□ -0.94
GTF2I-210ENST00000490431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.15□□□□□ -0.944e-7■■■□□ 16.1
GTF2I-210ENST00000490431 CACNB1Q02641 598 aaPredicted RBP9.1□□□□□ -0.95
GTF2I-210ENST00000490431 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
GTF2I-210ENST00000490431 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
GTF2I-210ENST00000490431 SLC4A1APQ9BWU0 796 aaKnown RBP9□□□□□ -0.97
GTF2I-210ENST00000490431 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
GTF2I-210ENST00000490431 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
GTF2I-210ENST00000490431 FOXD4L1Q9NU39 408 aa8.78□□□□□ -1
GTF2I-210ENST00000490431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.76□□□□□ -1.01
GTF2I-210ENST00000490431 CAPN15O75808 1086 aa8.76□□□□□ -1.01
GTF2I-210ENST00000490431 MYCNP04198 464 aaPredicted RBP8.76□□□□□ -1.01
GTF2I-210ENST00000490431 HNRNPUL2Q1KMD3 747 aaKnown RBP8.76□□□□□ -1.01
GTF2I-210ENST00000490431 ZBTB22O15209 634 aa8.75□□□□□ -1.01
GTF2I-210ENST00000490431 SAMD1Q6SPF0 538 aaPredicted RBP8.73□□□□□ -1.01
GTF2I-210ENST00000490431 APLP2Q06481 763 aa8.7□□□□□ -1.02
GTF2I-210ENST00000490431 TRHP20396 242 aaPredicted RBP8.68□□□□□ -1.02
GTF2I-210ENST00000490431 DSG3P32926 999 aa8.67□□□□□ -1.02
GTF2I-210ENST00000490431 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
GTF2I-210ENST00000490431 ABCB7O75027 752 aa8.59□□□□□ -1.03
GTF2I-210ENST00000490431 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
GTF2I-210ENST00000490431 CSRNP3Q8WYN3 585 aa8.53□□□□□ -1.04
GTF2I-210ENST00000490431 EHMT2Q96KQ7 1210 aa8.51□□□□□ -1.05
GTF2I-210ENST00000490431 POLA2Q14181 598 aa8.5□□□□□ -1.05
GTF2I-210ENST00000490431 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
GTF2I-210ENST00000490431 ZBTB12Q9Y330 459 aaPredicted RBP8.29□□□□□ -1.08
GTF2I-210ENST00000490431 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
GTF2I-210ENST00000490431 FBLN2P98095 1184 aa8.19□□□□□ -1.1
GTF2I-210ENST00000490431 MKRN4PQ13434 485 aaPredicted RBP8.19□□□□□ -1.1
GTF2I-210ENST00000490431 OSCARQ8IYS5 282 aa8.19□□□□□ -1.1
GTF2I-210ENST00000490431 AKT1S1Q96B36 256 aa8.11□□□□□ -1.11
GTF2I-210ENST00000490431 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
GTF2I-210ENST00000490431 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
GTF2I-210ENST00000490431 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
GTF2I-210ENST00000490431 REM2Q8IYK8 340 aaPredicted RBP8.05□□□□□ -1.12
GTF2I-210ENST00000490431 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
GTF2I-210ENST00000490431 CHRDL2Q6WN34 429 aa8□□□□□ -1.13
GTF2I-210ENST00000490431 SSUH2Q9Y2M2 353 aa8□□□□□ -1.13
GTF2I-210ENST00000490431 POTEHQ6S545 545 aa7.99□□□□□ -1.13
GTF2I-210ENST00000490431 PITPNM1O00562 1244 aa7.95□□□□□ -1.14
GTF2I-210ENST00000490431 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
GTF2I-210ENST00000490431 SPDYE4A6NLX3 237 aa7.89□□□□□ -1.15
GTF2I-210ENST00000490431 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
GTF2I-210ENST00000490431 CLEC11AQ9Y240 323 aa7.88□□□□□ -1.15
GTF2I-210ENST00000490431 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
GTF2I-210ENST00000490431 FXR2P51116 673 aaKnown RBP eCLIP7.85□□□□□ -1.153e-7■■■□□ 16.2
GTF2I-210ENST00000490431 PRR29P0C7W0 189 aa7.78□□□□□ -1.16
GTF2I-210ENST00000490431 PRKAR2AP13861 404 aaKnown RBP7.75□□□□□ -1.17
GTF2I-210ENST00000490431 PROM2Q8N271 834 aa7.73□□□□□ -1.17
GTF2I-210ENST00000490431 CHADLQ6NUI6 762 aa7.72□□□□□ -1.17
GTF2I-210ENST00000490431 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
GTF2I-210ENST00000490431 FKBP8Q14318 412 aa7.7□□□□□ -1.18
GTF2I-210ENST00000490431 HAX1O00165 279 aa7.67□□□□□ -1.18
GTF2I-210ENST00000490431 CREBZFQ9NS37 354 aa7.64□□□□□ -1.19
GTF2I-210ENST00000490431 EVX2Q03828 476 aa7.63□□□□□ -1.19
GTF2I-210ENST00000490431 FARP1Q9Y4F1 1045 aaPredicted RBP7.62□□□□□ -1.19
GTF2I-210ENST00000490431 C19orf67A6NJJ6 358 aa7.59□□□□□ -1.19
GTF2I-210ENST00000490431 SP7Q8TDD2 431 aaPredicted RBP7.58□□□□□ -1.2
GTF2I-210ENST00000490431 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
GTF2I-210ENST00000490431 MIER1Q8N108 512 aa7.52□□□□□ -1.21
GTF2I-210ENST00000490431 CD44P16070 742 aaKnown RBP7.5□□□□□ -1.21
GTF2I-210ENST00000490431 NPM1P06748 294 aaKnown RBP eCLIP7.48□□□□□ -1.21
GTF2I-210ENST00000490431 PLCD3Q8N3E9 789 aa7.47□□□□□ -1.21
GTF2I-210ENST00000490431 FBXO3Q9UK99 471 aa7.46□□□□□ -1.22
GTF2I-210ENST00000490431 PLEKHG5O94827 1062 aa7.45□□□□□ -1.22
GTF2I-210ENST00000490431 GABBR2O75899 941 aa7.44□□□□□ -1.22
GTF2I-210ENST00000490431 ZRANB1Q9UGI0 708 aa7.44□□□□□ -1.22
GTF2I-210ENST00000490431 PAK3O75914 559 aaPredicted RBP7.39□□□□□ -1.23
GTF2I-210ENST00000490431 ZNF579Q8NAF0 562 aaKnown RBP7.39□□□□□ -1.23
GTF2I-210ENST00000490431 VASPP50552 380 aaPredicted RBP7.38□□□□□ -1.23
GTF2I-210ENST00000490431 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
GTF2I-210ENST00000490431 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
GTF2I-210ENST00000490431 PHF12Q96QT6 1004 aa7.36□□□□□ -1.23
GTF2I-210ENST00000490431 ZBTB47Q9UFB7 747 aaPredicted RBP7.36□□□□□ -1.23
GTF2I-210ENST00000490431 CLCN6P51797 869 aa7.35□□□□□ -1.23
GTF2I-210ENST00000490431 NUBP1P53384 320 aa7.35□□□□□ -1.23
GTF2I-210ENST00000490431 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms