RNA–Protein interactions for RNA: ENST00000490375.1

LNCSRLR-201, Transcript of lncRNA sorafenib resistance in renal cell carcinoma associated, humanhuman

TSL 3 BASIC

Gene LNCSRLR, Length 709 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNCSRLR-201ENST00000490375 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
LNCSRLR-201ENST00000490375 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
LNCSRLR-201ENST00000490375 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
LNCSRLR-201ENST00000490375 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
LNCSRLR-201ENST00000490375 FOXD1Q16676 465 aa21.97■■□□□ 1.11
LNCSRLR-201ENST00000490375 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
LNCSRLR-201ENST00000490375 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
LNCSRLR-201ENST00000490375 ADRA2BP18089 450 aa20.95■□□□□ 0.94
LNCSRLR-201ENST00000490375 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
LNCSRLR-201ENST00000490375 MSH5O43196 834 aa20.17■□□□□ 0.82
LNCSRLR-201ENST00000490375 MAPK8IP2Q13387 824 aaPredicted RBP19.11■□□□□ 0.65
LNCSRLR-201ENST00000490375 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
LNCSRLR-201ENST00000490375 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
LNCSRLR-201ENST00000490375 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
LNCSRLR-201ENST00000490375 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
LNCSRLR-201ENST00000490375 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
LNCSRLR-201ENST00000490375 KCNA4P22459 653 aa18.46■□□□□ 0.55
LNCSRLR-201ENST00000490375 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
LNCSRLR-201ENST00000490375 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
LNCSRLR-201ENST00000490375 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
LNCSRLR-201ENST00000490375 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
LNCSRLR-201ENST00000490375 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
LNCSRLR-201ENST00000490375 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
LNCSRLR-201ENST00000490375 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
LNCSRLR-201ENST00000490375 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
LNCSRLR-201ENST00000490375 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
LNCSRLR-201ENST00000490375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
LNCSRLR-201ENST00000490375 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
LNCSRLR-201ENST00000490375 ZBTB22O15209 634 aa17.06■□□□□ 0.32
LNCSRLR-201ENST00000490375 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
LNCSRLR-201ENST00000490375 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
LNCSRLR-201ENST00000490375 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
LNCSRLR-201ENST00000490375 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
LNCSRLR-201ENST00000490375 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
LNCSRLR-201ENST00000490375 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
LNCSRLR-201ENST00000490375 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
LNCSRLR-201ENST00000490375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
LNCSRLR-201ENST00000490375 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
LNCSRLR-201ENST00000490375 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
LNCSRLR-201ENST00000490375 CAPN15O75808 1086 aa16.62■□□□□ 0.25
LNCSRLR-201ENST00000490375 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
LNCSRLR-201ENST00000490375 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
LNCSRLR-201ENST00000490375 DSG3P32926 999 aa16.47■□□□□ 0.23
LNCSRLR-201ENST00000490375 APLP2Q06481 763 aa16.47■□□□□ 0.23
LNCSRLR-201ENST00000490375 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
LNCSRLR-201ENST00000490375 ABCB7O75027 752 aa16.37■□□□□ 0.21
LNCSRLR-201ENST00000490375 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
LNCSRLR-201ENST00000490375 POLA2Q14181 598 aa16.21■□□□□ 0.19
LNCSRLR-201ENST00000490375 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
LNCSRLR-201ENST00000490375 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
LNCSRLR-201ENST00000490375 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
LNCSRLR-201ENST00000490375 FBLN2P98095 1184 aa15.63■□□□□ 0.09
LNCSRLR-201ENST00000490375 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
LNCSRLR-201ENST00000490375 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
LNCSRLR-201ENST00000490375 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
LNCSRLR-201ENST00000490375 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
LNCSRLR-201ENST00000490375 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
LNCSRLR-201ENST00000490375 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
LNCSRLR-201ENST00000490375 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
LNCSRLR-201ENST00000490375 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
LNCSRLR-201ENST00000490375 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
LNCSRLR-201ENST00000490375 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
LNCSRLR-201ENST00000490375 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
LNCSRLR-201ENST00000490375 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
LNCSRLR-201ENST00000490375 FKBP8Q14318 412 aa15.04■□□□□ -0
LNCSRLR-201ENST00000490375 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
LNCSRLR-201ENST00000490375 PROM2Q8N271 834 aa14.98□□□□□ -0.01
LNCSRLR-201ENST00000490375 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
LNCSRLR-201ENST00000490375 POTEHQ6S545 545 aa14.9□□□□□ -0.02
LNCSRLR-201ENST00000490375 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
LNCSRLR-201ENST00000490375 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.03
LNCSRLR-201ENST00000490375 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
LNCSRLR-201ENST00000490375 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
LNCSRLR-201ENST00000490375 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
LNCSRLR-201ENST00000490375 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
LNCSRLR-201ENST00000490375 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
LNCSRLR-201ENST00000490375 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
LNCSRLR-201ENST00000490375 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
LNCSRLR-201ENST00000490375 EVX2Q03828 476 aa14.46□□□□□ -0.09
LNCSRLR-201ENST00000490375 MIER1Q8N108 512 aa14.43□□□□□ -0.1
LNCSRLR-201ENST00000490375 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
LNCSRLR-201ENST00000490375 HAX1O00165 279 aa14.41□□□□□ -0.1
LNCSRLR-201ENST00000490375 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
LNCSRLR-201ENST00000490375 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
LNCSRLR-201ENST00000490375 PLCD3Q8N3E9 789 aa14.35□□□□□ -0.11
LNCSRLR-201ENST00000490375 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
LNCSRLR-201ENST00000490375 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
LNCSRLR-201ENST00000490375 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
LNCSRLR-201ENST00000490375 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
LNCSRLR-201ENST00000490375 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
LNCSRLR-201ENST00000490375 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
LNCSRLR-201ENST00000490375 NUBP1P53384 320 aa14.17□□□□□ -0.14
LNCSRLR-201ENST00000490375 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
LNCSRLR-201ENST00000490375 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
LNCSRLR-201ENST00000490375 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
LNCSRLR-201ENST00000490375 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
LNCSRLR-201ENST00000490375 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
LNCSRLR-201ENST00000490375 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
LNCSRLR-201ENST00000490375 GABBR2O75899 941 aa14.04□□□□□ -0.16
LNCSRLR-201ENST00000490375 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms