RNA–Protein interactions for RNA: ENST00000490221.5

CCT3-214, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-214ENST00000490221 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
CCT3-214ENST00000490221 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
CCT3-214ENST00000490221 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
CCT3-214ENST00000490221 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
CCT3-214ENST00000490221 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
CCT3-214ENST00000490221 FOXD1Q16676 465 aa14.51□□□□□ -0.09
CCT3-214ENST00000490221 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
CCT3-214ENST00000490221 ADRA2BP18089 450 aa14.15□□□□□ -0.14
CCT3-214ENST00000490221 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
CCT3-214ENST00000490221 MSH5O43196 834 aa13.37□□□□□ -0.27
CCT3-214ENST00000490221 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
CCT3-214ENST00000490221 KCNA4P22459 653 aa13.09□□□□□ -0.31
CCT3-214ENST00000490221 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
CCT3-214ENST00000490221 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
CCT3-214ENST00000490221 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
CCT3-214ENST00000490221 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
CCT3-214ENST00000490221 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
CCT3-214ENST00000490221 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
CCT3-214ENST00000490221 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
CCT3-214ENST00000490221 SLC4A1APQ9BWU0 796 aaKnown RBP12.42□□□□□ -0.42
CCT3-214ENST00000490221 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
CCT3-214ENST00000490221 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
CCT3-214ENST00000490221 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
CCT3-214ENST00000490221 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
CCT3-214ENST00000490221 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
CCT3-214ENST00000490221 ZBTB22O15209 634 aa12.12□□□□□ -0.47
CCT3-214ENST00000490221 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
CCT3-214ENST00000490221 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
CCT3-214ENST00000490221 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
CCT3-214ENST00000490221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.541e-10■■□□□ 12.9
CCT3-214ENST00000490221 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
CCT3-214ENST00000490221 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
CCT3-214ENST00000490221 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
CCT3-214ENST00000490221 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
CCT3-214ENST00000490221 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
CCT3-214ENST00000490221 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
CCT3-214ENST00000490221 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
CCT3-214ENST00000490221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
CCT3-214ENST00000490221 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
CCT3-214ENST00000490221 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
CCT3-214ENST00000490221 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
CCT3-214ENST00000490221 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
CCT3-214ENST00000490221 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
CCT3-214ENST00000490221 APLP2Q06481 763 aa11.1□□□□□ -0.63
CCT3-214ENST00000490221 CAPN15O75808 1086 aa11.09□□□□□ -0.63
CCT3-214ENST00000490221 ABCB7O75027 752 aa10.98□□□□□ -0.65
CCT3-214ENST00000490221 POLA2Q14181 598 aa10.98□□□□□ -0.65
CCT3-214ENST00000490221 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CCT3-214ENST00000490221 DSG3P32926 999 aa10.9□□□□□ -0.66
CCT3-214ENST00000490221 FKBP8Q14318 412 aa10.9□□□□□ -0.66
CCT3-214ENST00000490221 FBLN2P98095 1184 aa10.75□□□□□ -0.69
CCT3-214ENST00000490221 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
CCT3-214ENST00000490221 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
CCT3-214ENST00000490221 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
CCT3-214ENST00000490221 PROM2Q8N271 834 aa10.57□□□□□ -0.72
CCT3-214ENST00000490221 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
CCT3-214ENST00000490221 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
CCT3-214ENST00000490221 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
CCT3-214ENST00000490221 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
CCT3-214ENST00000490221 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
CCT3-214ENST00000490221 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCT3-214ENST00000490221 NISCHQ9Y2I1 1504 aa10.34□□□□□ -0.75
CCT3-214ENST00000490221 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
CCT3-214ENST00000490221 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
CCT3-214ENST00000490221 VASPP50552 380 aaPredicted RBP10.29□□□□□ -0.76
CCT3-214ENST00000490221 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
CCT3-214ENST00000490221 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
CCT3-214ENST00000490221 POTEHQ6S545 545 aa10.22□□□□□ -0.77
CCT3-214ENST00000490221 AKT1S1Q96B36 256 aa10.21□□□□□ -0.77
CCT3-214ENST00000490221 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
CCT3-214ENST00000490221 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
CCT3-214ENST00000490221 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
CCT3-214ENST00000490221 MIER1Q8N108 512 aa10.1□□□□□ -0.79
CCT3-214ENST00000490221 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
CCT3-214ENST00000490221 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
CCT3-214ENST00000490221 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
CCT3-214ENST00000490221 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
CCT3-214ENST00000490221 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
CCT3-214ENST00000490221 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
CCT3-214ENST00000490221 PRR29P0C7W0 189 aa10□□□□□ -0.81
CCT3-214ENST00000490221 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
CCT3-214ENST00000490221 PKD2Q13563 968 aa9.97□□□□□ -0.81
CCT3-214ENST00000490221 MNX1P50219 401 aaPredicted RBP9.95□□□□□ -0.82
CCT3-214ENST00000490221 CHRDL2Q6WN34 429 aa9.94□□□□□ -0.82
CCT3-214ENST00000490221 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
CCT3-214ENST00000490221 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
CCT3-214ENST00000490221 NUBP1P53384 320 aa9.88□□□□□ -0.83
CCT3-214ENST00000490221 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.835e-6■■□□□ 11.5
CCT3-214ENST00000490221 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
CCT3-214ENST00000490221 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
CCT3-214ENST00000490221 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
CCT3-214ENST00000490221 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
CCT3-214ENST00000490221 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
CCT3-214ENST00000490221 ECM2O94769 699 aaPredicted RBP9.79□□□□□ -0.84
CCT3-214ENST00000490221 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
CCT3-214ENST00000490221 RGL2O15211 777 aa9.77□□□□□ -0.85
CCT3-214ENST00000490221 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
CCT3-214ENST00000490221 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
CCT3-214ENST00000490221 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCT3-214ENST00000490221 GSE1Q14687 1217 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms