RNA–Protein interactions for RNA: ENST00000490028.5

CLCA3P-203, Transcript of chloride channel accessory 3, pseudogene, humanhuman

BASIC

Gene CLCA3P, Length 2,781 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-203ENST00000490028 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
CLCA3P-203ENST00000490028 NISCHQ9Y2I1 1504 aa14.55□□□□□ -0.08
CLCA3P-203ENST00000490028 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
CLCA3P-203ENST00000490028 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
CLCA3P-203ENST00000490028 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
CLCA3P-203ENST00000490028 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
CLCA3P-203ENST00000490028 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
CLCA3P-203ENST00000490028 SHROOM4Q9ULL8 1493 aa12.12□□□□□ -0.47
CLCA3P-203ENST00000490028 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
CLCA3P-203ENST00000490028 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
CLCA3P-203ENST00000490028 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
CLCA3P-203ENST00000490028 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
CLCA3P-203ENST00000490028 ABCC9O60706 1549 aa11.62□□□□□ -0.55
CLCA3P-203ENST00000490028 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
CLCA3P-203ENST00000490028 FOXD1Q16676 465 aa11.55□□□□□ -0.56
CLCA3P-203ENST00000490028 NACADO15069 1562 aa11.54□□□□□ -0.56
CLCA3P-203ENST00000490028 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
CLCA3P-203ENST00000490028 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
CLCA3P-203ENST00000490028 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
CLCA3P-203ENST00000490028 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.61
CLCA3P-203ENST00000490028 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
CLCA3P-203ENST00000490028 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
CLCA3P-203ENST00000490028 WIZO95785 1651 aa11.18□□□□□ -0.62
CLCA3P-203ENST00000490028 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
CLCA3P-203ENST00000490028 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
CLCA3P-203ENST00000490028 HRCP23327 699 aa11.12□□□□□ -0.63
CLCA3P-203ENST00000490028 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
CLCA3P-203ENST00000490028 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
CLCA3P-203ENST00000490028 SMARCA4P51532 1647 aa11.1□□□□□ -0.63
CLCA3P-203ENST00000490028 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
CLCA3P-203ENST00000490028 PPP6R1Q9UPN7 881 aa11.08□□□□□ -0.64
CLCA3P-203ENST00000490028 PCGF6Q9BYE7 350 aa11.07□□□□□ -0.64
CLCA3P-203ENST00000490028 ADRA2BP18089 450 aa11.05□□□□□ -0.64
CLCA3P-203ENST00000490028 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
CLCA3P-203ENST00000490028 SMARCA2P51531 1590 aa11□□□□□ -0.65
CLCA3P-203ENST00000490028 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
CLCA3P-203ENST00000490028 CCDC88BA6NC98 1476 aa10.97□□□□□ -0.65
CLCA3P-203ENST00000490028 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.65
CLCA3P-203ENST00000490028 FAM9AQ8IZU1 332 aaPredicted RBP10.92□□□□□ -0.66
CLCA3P-203ENST00000490028 ABCC8Q09428 1581 aa10.87□□□□□ -0.67
CLCA3P-203ENST00000490028 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
CLCA3P-203ENST00000490028 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLCA3P-203ENST00000490028 EEA1Q15075 1411 aa10.83□□□□□ -0.68
CLCA3P-203ENST00000490028 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
CLCA3P-203ENST00000490028 PPARGC1BQ86YN6 1023 aaKnown RBP10.77□□□□□ -0.69
CLCA3P-203ENST00000490028 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
CLCA3P-203ENST00000490028 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.69
CLCA3P-203ENST00000490028 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
CLCA3P-203ENST00000490028 SOGA1O94964 1423 aa10.75□□□□□ -0.69
CLCA3P-203ENST00000490028 POTEDQ86YR6 584 aa10.75□□□□□ -0.69
CLCA3P-203ENST00000490028 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
CLCA3P-203ENST00000490028 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
CLCA3P-203ENST00000490028 SYNJ1O43426 1573 aa10.71□□□□□ -0.7
CLCA3P-203ENST00000490028 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
CLCA3P-203ENST00000490028 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
CLCA3P-203ENST00000490028 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
CLCA3P-203ENST00000490028 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
CLCA3P-203ENST00000490028 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
CLCA3P-203ENST00000490028 KIF21BO75037 1637 aa10.68□□□□□ -0.7
CLCA3P-203ENST00000490028 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
CLCA3P-203ENST00000490028 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
CLCA3P-203ENST00000490028 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
CLCA3P-203ENST00000490028 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
CLCA3P-203ENST00000490028 MSH5O43196 834 aa10.61□□□□□ -0.71
CLCA3P-203ENST00000490028 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
CLCA3P-203ENST00000490028 CLIP1P30622 1438 aa10.53□□□□□ -0.72
CLCA3P-203ENST00000490028 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
CLCA3P-203ENST00000490028 CFTRP13569 1480 aa10.52□□□□□ -0.72
CLCA3P-203ENST00000490028 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
CLCA3P-203ENST00000490028 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
CLCA3P-203ENST00000490028 VPS8Q8N3P4 1428 aa10.5□□□□□ -0.73
CLCA3P-203ENST00000490028 CUX1P39880 1505 aa10.5□□□□□ -0.73
CLCA3P-203ENST00000490028 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
CLCA3P-203ENST00000490028 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.73
CLCA3P-203ENST00000490028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.74
CLCA3P-203ENST00000490028 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
CLCA3P-203ENST00000490028 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
CLCA3P-203ENST00000490028 ARAP1Q96P48 1450 aa10.39□□□□□ -0.75
CLCA3P-203ENST00000490028 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
CLCA3P-203ENST00000490028 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
CLCA3P-203ENST00000490028 APLP2Q06481 763 aa10.36□□□□□ -0.75
CLCA3P-203ENST00000490028 CUX2O14529 1486 aa10.32□□□□□ -0.76
CLCA3P-203ENST00000490028 FGD5Q6ZNL6 1462 aa10.31□□□□□ -0.76
CLCA3P-203ENST00000490028 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
CLCA3P-203ENST00000490028 IGF1RP08069 1367 aa10.3□□□□□ -0.76
CLCA3P-203ENST00000490028 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
CLCA3P-203ENST00000490028 FANCD2Q9BXW9 1451 aa10.28□□□□□ -0.76
CLCA3P-203ENST00000490028 RRBP1Q9P2E9 1410 aaKnown RBP10.27□□□□□ -0.77
CLCA3P-203ENST00000490028 HNRNPUL2Q1KMD3 747 aaKnown RBP10.26□□□□□ -0.77
CLCA3P-203ENST00000490028 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
CLCA3P-203ENST00000490028 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
CLCA3P-203ENST00000490028 CARMIL1Q5VZK9 1371 aa10.25□□□□□ -0.77
CLCA3P-203ENST00000490028 ABCA10Q8WWZ4 1543 aa10.24□□□□□ -0.77
CLCA3P-203ENST00000490028 DIEXFQ68CQ4 756 aaKnown RBP10.23□□□□□ -0.77
CLCA3P-203ENST00000490028 CLSPNQ9HAW4 1339 aa10.23□□□□□ -0.77
CLCA3P-203ENST00000490028 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
CLCA3P-203ENST00000490028 ZNF316A6NFI3 1004 aaPredicted RBP10.22□□□□□ -0.77
CLCA3P-203ENST00000490028 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
CLCA3P-203ENST00000490028 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
CLCA3P-203ENST00000490028 TIAM1Q13009 1591 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms