RNA–Protein interactions for RNA: ENST00000489621.1

PDCL3P4-201, Transcript of phosducin-like 3 pseudogene 4, humanhuman

BASIC

Gene PDCL3P4, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P4-201ENST00000489621 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
PDCL3P4-201ENST00000489621 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
PDCL3P4-201ENST00000489621 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
PDCL3P4-201ENST00000489621 PHF23Q9BUL5 403 aaPredicted RBP20.27■□□□□ 0.84
PDCL3P4-201ENST00000489621 FOXD1Q16676 465 aa19.04■□□□□ 0.64
PDCL3P4-201ENST00000489621 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
PDCL3P4-201ENST00000489621 ADRA2BP18089 450 aa17.99■□□□□ 0.47
PDCL3P4-201ENST00000489621 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
PDCL3P4-201ENST00000489621 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
PDCL3P4-201ENST00000489621 MSH5O43196 834 aa17.77■□□□□ 0.44
PDCL3P4-201ENST00000489621 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
PDCL3P4-201ENST00000489621 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
PDCL3P4-201ENST00000489621 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
PDCL3P4-201ENST00000489621 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
PDCL3P4-201ENST00000489621 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
PDCL3P4-201ENST00000489621 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
PDCL3P4-201ENST00000489621 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
PDCL3P4-201ENST00000489621 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
PDCL3P4-201ENST00000489621 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
PDCL3P4-201ENST00000489621 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
PDCL3P4-201ENST00000489621 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
PDCL3P4-201ENST00000489621 KCNA4P22459 653 aa15.52■□□□□ 0.08
PDCL3P4-201ENST00000489621 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
PDCL3P4-201ENST00000489621 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
PDCL3P4-201ENST00000489621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDCL3P4-201ENST00000489621 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
PDCL3P4-201ENST00000489621 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
PDCL3P4-201ENST00000489621 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
PDCL3P4-201ENST00000489621 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
PDCL3P4-201ENST00000489621 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
PDCL3P4-201ENST00000489621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
PDCL3P4-201ENST00000489621 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
PDCL3P4-201ENST00000489621 CAPN15O75808 1086 aa14.5□□□□□ -0.09
PDCL3P4-201ENST00000489621 APLP2Q06481 763 aa14.49□□□□□ -0.09
PDCL3P4-201ENST00000489621 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
PDCL3P4-201ENST00000489621 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
PDCL3P4-201ENST00000489621 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
PDCL3P4-201ENST00000489621 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
PDCL3P4-201ENST00000489621 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
PDCL3P4-201ENST00000489621 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
PDCL3P4-201ENST00000489621 DSG3P32926 999 aa14.27□□□□□ -0.13
PDCL3P4-201ENST00000489621 ZBTB22O15209 634 aa14.22□□□□□ -0.13
PDCL3P4-201ENST00000489621 ABCB7O75027 752 aa14.16□□□□□ -0.14
PDCL3P4-201ENST00000489621 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
PDCL3P4-201ENST00000489621 POLA2Q14181 598 aa13.98□□□□□ -0.17
PDCL3P4-201ENST00000489621 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
PDCL3P4-201ENST00000489621 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
PDCL3P4-201ENST00000489621 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
PDCL3P4-201ENST00000489621 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
PDCL3P4-201ENST00000489621 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
PDCL3P4-201ENST00000489621 FBLN2P98095 1184 aa13.57□□□□□ -0.24
PDCL3P4-201ENST00000489621 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
PDCL3P4-201ENST00000489621 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
PDCL3P4-201ENST00000489621 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
PDCL3P4-201ENST00000489621 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
PDCL3P4-201ENST00000489621 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
PDCL3P4-201ENST00000489621 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
PDCL3P4-201ENST00000489621 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
PDCL3P4-201ENST00000489621 POTEHQ6S545 545 aa13.25□□□□□ -0.29
PDCL3P4-201ENST00000489621 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
PDCL3P4-201ENST00000489621 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
PDCL3P4-201ENST00000489621 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
PDCL3P4-201ENST00000489621 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
PDCL3P4-201ENST00000489621 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
PDCL3P4-201ENST00000489621 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDCL3P4-201ENST00000489621 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
PDCL3P4-201ENST00000489621 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
PDCL3P4-201ENST00000489621 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
PDCL3P4-201ENST00000489621 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDCL3P4-201ENST00000489621 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
PDCL3P4-201ENST00000489621 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
PDCL3P4-201ENST00000489621 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
PDCL3P4-201ENST00000489621 HAX1O00165 279 aa12.72□□□□□ -0.37
PDCL3P4-201ENST00000489621 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
PDCL3P4-201ENST00000489621 FKBP8Q14318 412 aa12.62□□□□□ -0.39
PDCL3P4-201ENST00000489621 PROM2Q8N271 834 aa12.61□□□□□ -0.39
PDCL3P4-201ENST00000489621 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PDCL3P4-201ENST00000489621 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
PDCL3P4-201ENST00000489621 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
PDCL3P4-201ENST00000489621 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
PDCL3P4-201ENST00000489621 NISCHQ9Y2I1 1504 aa12.49□□□□□ -0.41
PDCL3P4-201ENST00000489621 EVX2Q03828 476 aa12.47□□□□□ -0.41
PDCL3P4-201ENST00000489621 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
PDCL3P4-201ENST00000489621 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
PDCL3P4-201ENST00000489621 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDCL3P4-201ENST00000489621 MIER1Q8N108 512 aa12.38□□□□□ -0.43
PDCL3P4-201ENST00000489621 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
PDCL3P4-201ENST00000489621 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
PDCL3P4-201ENST00000489621 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
PDCL3P4-201ENST00000489621 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
PDCL3P4-201ENST00000489621 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
PDCL3P4-201ENST00000489621 GABBR2O75899 941 aa12.26□□□□□ -0.45
PDCL3P4-201ENST00000489621 CLCN6P51797 869 aa12.21□□□□□ -0.45
PDCL3P4-201ENST00000489621 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
PDCL3P4-201ENST00000489621 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
PDCL3P4-201ENST00000489621 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
PDCL3P4-201ENST00000489621 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
PDCL3P4-201ENST00000489621 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
PDCL3P4-201ENST00000489621 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
PDCL3P4-201ENST00000489621 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms