RNA–Protein interactions for RNA: ENST00000489572.5

MRRF-212, Transcript of mitochondrial ribosome recycling factor, humanhuman

TSL 1 (best)

Gene MRRF, Length 1,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRF-212ENST00000489572 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
MRRF-212ENST00000489572 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
MRRF-212ENST00000489572 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
MRRF-212ENST00000489572 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
MRRF-212ENST00000489572 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
MRRF-212ENST00000489572 DCAF1Q9Y4B6 1507 aa19.74■□□□□ 0.75
MRRF-212ENST00000489572 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
MRRF-212ENST00000489572 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
MRRF-212ENST00000489572 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
MRRF-212ENST00000489572 ABCC9O60706 1549 aa19.03■□□□□ 0.64
MRRF-212ENST00000489572 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
MRRF-212ENST00000489572 HRCP23327 699 aa18.82■□□□□ 0.6
MRRF-212ENST00000489572 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
MRRF-212ENST00000489572 NACADO15069 1562 aa18.68■□□□□ 0.58
MRRF-212ENST00000489572 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
MRRF-212ENST00000489572 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
MRRF-212ENST00000489572 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
MRRF-212ENST00000489572 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
MRRF-212ENST00000489572 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
MRRF-212ENST00000489572 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
MRRF-212ENST00000489572 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
MRRF-212ENST00000489572 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
MRRF-212ENST00000489572 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
MRRF-212ENST00000489572 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
MRRF-212ENST00000489572 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
MRRF-212ENST00000489572 WIZO95785 1651 aa18.15■□□□□ 0.5
MRRF-212ENST00000489572 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.49
MRRF-212ENST00000489572 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
MRRF-212ENST00000489572 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
MRRF-212ENST00000489572 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
MRRF-212ENST00000489572 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
MRRF-212ENST00000489572 EEA1Q15075 1411 aa17.91■□□□□ 0.46
MRRF-212ENST00000489572 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
MRRF-212ENST00000489572 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
MRRF-212ENST00000489572 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
MRRF-212ENST00000489572 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
MRRF-212ENST00000489572 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
MRRF-212ENST00000489572 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
MRRF-212ENST00000489572 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
MRRF-212ENST00000489572 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
MRRF-212ENST00000489572 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
MRRF-212ENST00000489572 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
MRRF-212ENST00000489572 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
MRRF-212ENST00000489572 KIF21BO75037 1637 aa17.59■□□□□ 0.41
MRRF-212ENST00000489572 SOGA1O94964 1423 aa17.56■□□□□ 0.4
MRRF-212ENST00000489572 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
MRRF-212ENST00000489572 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
MRRF-212ENST00000489572 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
MRRF-212ENST00000489572 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
MRRF-212ENST00000489572 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
MRRF-212ENST00000489572 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
MRRF-212ENST00000489572 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
MRRF-212ENST00000489572 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
MRRF-212ENST00000489572 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
MRRF-212ENST00000489572 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
MRRF-212ENST00000489572 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
MRRF-212ENST00000489572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
MRRF-212ENST00000489572 VPS8Q8N3P4 1428 aa17.34■□□□□ 0.37
MRRF-212ENST00000489572 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.36
MRRF-212ENST00000489572 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
MRRF-212ENST00000489572 CLIP1P30622 1438 aa17.31■□□□□ 0.36
MRRF-212ENST00000489572 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
MRRF-212ENST00000489572 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
MRRF-212ENST00000489572 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.353e-7■□□□□ 10.7
MRRF-212ENST00000489572 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
MRRF-212ENST00000489572 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
MRRF-212ENST00000489572 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
MRRF-212ENST00000489572 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
MRRF-212ENST00000489572 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
MRRF-212ENST00000489572 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
MRRF-212ENST00000489572 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
MRRF-212ENST00000489572 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
MRRF-212ENST00000489572 PRDM2Q13029 1718 aa17.08■□□□□ 0.33
MRRF-212ENST00000489572 CFTRP13569 1480 aa17.08■□□□□ 0.32
MRRF-212ENST00000489572 APLP2Q06481 763 aa17.06■□□□□ 0.32
MRRF-212ENST00000489572 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
MRRF-212ENST00000489572 CUX1P39880 1505 aa17.05■□□□□ 0.32
MRRF-212ENST00000489572 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
MRRF-212ENST00000489572 CUX2O14529 1486 aa17.03■□□□□ 0.32
MRRF-212ENST00000489572 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
MRRF-212ENST00000489572 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
MRRF-212ENST00000489572 MAP3K1Q13233 1512 aa16.99■□□□□ 0.31
MRRF-212ENST00000489572 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
MRRF-212ENST00000489572 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
MRRF-212ENST00000489572 ARHGAP35Q9NRY4 1499 aa16.89■□□□□ 0.29
MRRF-212ENST00000489572 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
MRRF-212ENST00000489572 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
MRRF-212ENST00000489572 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
MRRF-212ENST00000489572 FOXD1Q16676 465 aa16.8■□□□□ 0.28
MRRF-212ENST00000489572 TIAM1Q13009 1591 aa16.8■□□□□ 0.28
MRRF-212ENST00000489572 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
MRRF-212ENST00000489572 IGF1RP08069 1367 aa16.78■□□□□ 0.28
MRRF-212ENST00000489572 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
MRRF-212ENST00000489572 CFAP43Q8NDM7 1665 aa16.74■□□□□ 0.27
MRRF-212ENST00000489572 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
MRRF-212ENST00000489572 MIER1Q8N108 512 aa16.72■□□□□ 0.27
MRRF-212ENST00000489572 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
MRRF-212ENST00000489572 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
MRRF-212ENST00000489572 MYT1Q01538 1121 aa16.7■□□□□ 0.26
MRRF-212ENST00000489572 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.267e-8■■■■■ 29.6
Retrieved 100 of 20,778 RNA–protein pairs in 431.9 ms