RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
RAB4A-204ENST00000489342 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
RAB4A-204ENST00000489342 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
RAB4A-204ENST00000489342 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
RAB4A-204ENST00000489342 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
RAB4A-204ENST00000489342 FOXD1Q16676 465 aa20.1■□□□□ 0.81
RAB4A-204ENST00000489342 ADRA2BP18089 450 aa19.25■□□□□ 0.67
RAB4A-204ENST00000489342 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
RAB4A-204ENST00000489342 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
RAB4A-204ENST00000489342 MSH5O43196 834 aa18.65■□□□□ 0.58
RAB4A-204ENST00000489342 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
RAB4A-204ENST00000489342 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
RAB4A-204ENST00000489342 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
RAB4A-204ENST00000489342 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
RAB4A-204ENST00000489342 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
RAB4A-204ENST00000489342 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
RAB4A-204ENST00000489342 KCNA4P22459 653 aa17.14■□□□□ 0.33
RAB4A-204ENST00000489342 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
RAB4A-204ENST00000489342 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
RAB4A-204ENST00000489342 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
RAB4A-204ENST00000489342 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
RAB4A-204ENST00000489342 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
RAB4A-204ENST00000489342 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
RAB4A-204ENST00000489342 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
RAB4A-204ENST00000489342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAB4A-204ENST00000489342 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
RAB4A-204ENST00000489342 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
RAB4A-204ENST00000489342 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
RAB4A-204ENST00000489342 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
RAB4A-204ENST00000489342 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
RAB4A-204ENST00000489342 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
RAB4A-204ENST00000489342 ZBTB22O15209 634 aa15.72■□□□□ 0.11
RAB4A-204ENST00000489342 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
RAB4A-204ENST00000489342 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
RAB4A-204ENST00000489342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
RAB4A-204ENST00000489342 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
RAB4A-204ENST00000489342 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
RAB4A-204ENST00000489342 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
RAB4A-204ENST00000489342 APLP2Q06481 763 aa15.55■□□□□ 0.08
RAB4A-204ENST00000489342 CAPN15O75808 1086 aa15.44■□□□□ 0.06
RAB4A-204ENST00000489342 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
RAB4A-204ENST00000489342 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
RAB4A-204ENST00000489342 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
RAB4A-204ENST00000489342 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
RAB4A-204ENST00000489342 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
RAB4A-204ENST00000489342 ABCB7O75027 752 aa15.12■□□□□ 0.01
RAB4A-204ENST00000489342 DSG3P32926 999 aa15.11■□□□□ 0.01
RAB4A-204ENST00000489342 POLA2Q14181 598 aa15.02■□□□□ -0
RAB4A-204ENST00000489342 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
RAB4A-204ENST00000489342 FBLN2P98095 1184 aa14.71□□□□□ -0.05
RAB4A-204ENST00000489342 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
RAB4A-204ENST00000489342 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
RAB4A-204ENST00000489342 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
RAB4A-204ENST00000489342 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
RAB4A-204ENST00000489342 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
RAB4A-204ENST00000489342 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
RAB4A-204ENST00000489342 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
RAB4A-204ENST00000489342 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
RAB4A-204ENST00000489342 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
RAB4A-204ENST00000489342 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
RAB4A-204ENST00000489342 FKBP8Q14318 412 aa14.16□□□□□ -0.14
RAB4A-204ENST00000489342 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB4A-204ENST00000489342 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
RAB4A-204ENST00000489342 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
RAB4A-204ENST00000489342 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
RAB4A-204ENST00000489342 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
RAB4A-204ENST00000489342 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
RAB4A-204ENST00000489342 PROM2Q8N271 834 aa13.87□□□□□ -0.19
RAB4A-204ENST00000489342 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
RAB4A-204ENST00000489342 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
RAB4A-204ENST00000489342 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
RAB4A-204ENST00000489342 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
RAB4A-204ENST00000489342 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB4A-204ENST00000489342 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
RAB4A-204ENST00000489342 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
RAB4A-204ENST00000489342 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
RAB4A-204ENST00000489342 POTEHQ6S545 545 aa13.58□□□□□ -0.24
RAB4A-204ENST00000489342 MIER1Q8N108 512 aa13.57□□□□□ -0.24
RAB4A-204ENST00000489342 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
RAB4A-204ENST00000489342 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
RAB4A-204ENST00000489342 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
RAB4A-204ENST00000489342 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
RAB4A-204ENST00000489342 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
RAB4A-204ENST00000489342 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAB4A-204ENST00000489342 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
RAB4A-204ENST00000489342 HAX1O00165 279 aa13.33□□□□□ -0.28
RAB4A-204ENST00000489342 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
RAB4A-204ENST00000489342 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
RAB4A-204ENST00000489342 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
RAB4A-204ENST00000489342 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
RAB4A-204ENST00000489342 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
RAB4A-204ENST00000489342 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
RAB4A-204ENST00000489342 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
RAB4A-204ENST00000489342 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
RAB4A-204ENST00000489342 NUBP1P53384 320 aa13.13□□□□□ -0.31
RAB4A-204ENST00000489342 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
RAB4A-204ENST00000489342 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
RAB4A-204ENST00000489342 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
RAB4A-204ENST00000489342 EVX2Q03828 476 aa13.09□□□□□ -0.31
RAB4A-204ENST00000489342 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms