RNA–Protein interactions for RNA: ENST00000489178.1

ALCAM-208, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 783 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-208ENST00000489178 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
ALCAM-208ENST00000489178 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
ALCAM-208ENST00000489178 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
ALCAM-208ENST00000489178 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
ALCAM-208ENST00000489178 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
ALCAM-208ENST00000489178 FOXD1Q16676 465 aa23.01■■□□□ 1.27
ALCAM-208ENST00000489178 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
ALCAM-208ENST00000489178 ADRA2BP18089 450 aa22.06■■□□□ 1.12
ALCAM-208ENST00000489178 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
ALCAM-208ENST00000489178 MSH5O43196 834 aa21.19■□□□□ 0.98
ALCAM-208ENST00000489178 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
ALCAM-208ENST00000489178 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
ALCAM-208ENST00000489178 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
ALCAM-208ENST00000489178 KCNA4P22459 653 aa19.84■□□□□ 0.77
ALCAM-208ENST00000489178 CNKSR2Q8WXI2 1034 aa19.8■□□□□ 0.76
ALCAM-208ENST00000489178 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
ALCAM-208ENST00000489178 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
ALCAM-208ENST00000489178 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
ALCAM-208ENST00000489178 RNF216Q9NWF9 866 aaPredicted RBP19.44■□□□□ 0.7
ALCAM-208ENST00000489178 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
ALCAM-208ENST00000489178 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
ALCAM-208ENST00000489178 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
ALCAM-208ENST00000489178 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
ALCAM-208ENST00000489178 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
ALCAM-208ENST00000489178 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
ALCAM-208ENST00000489178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
ALCAM-208ENST00000489178 ZBTB22O15209 634 aa18.29■□□□□ 0.52
ALCAM-208ENST00000489178 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
ALCAM-208ENST00000489178 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
ALCAM-208ENST00000489178 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
ALCAM-208ENST00000489178 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
ALCAM-208ENST00000489178 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
ALCAM-208ENST00000489178 MYCNP04198 464 aaPredicted RBP18.03■□□□□ 0.48
ALCAM-208ENST00000489178 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
ALCAM-208ENST00000489178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
ALCAM-208ENST00000489178 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
ALCAM-208ENST00000489178 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
ALCAM-208ENST00000489178 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
ALCAM-208ENST00000489178 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
ALCAM-208ENST00000489178 APLP2Q06481 763 aa17.64■□□□□ 0.41
ALCAM-208ENST00000489178 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
ALCAM-208ENST00000489178 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
ALCAM-208ENST00000489178 CAPN15O75808 1086 aa17.46■□□□□ 0.39
ALCAM-208ENST00000489178 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
ALCAM-208ENST00000489178 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
ALCAM-208ENST00000489178 DSG3P32926 999 aa17.3■□□□□ 0.36
ALCAM-208ENST00000489178 POLA2Q14181 598 aa17.15■□□□□ 0.34
ALCAM-208ENST00000489178 ABCB7O75027 752 aa17.14■□□□□ 0.33
ALCAM-208ENST00000489178 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
ALCAM-208ENST00000489178 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
ALCAM-208ENST00000489178 FBLN2P98095 1184 aa16.74■□□□□ 0.27
ALCAM-208ENST00000489178 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
ALCAM-208ENST00000489178 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
ALCAM-208ENST00000489178 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
ALCAM-208ENST00000489178 SPDYE2Q495Y8 402 aa16.44■□□□□ 0.22
ALCAM-208ENST00000489178 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
ALCAM-208ENST00000489178 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
ALCAM-208ENST00000489178 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
ALCAM-208ENST00000489178 FKBP8Q14318 412 aa16.32■□□□□ 0.2
ALCAM-208ENST00000489178 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
ALCAM-208ENST00000489178 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
ALCAM-208ENST00000489178 PROM2Q8N271 834 aa16.24■□□□□ 0.19
ALCAM-208ENST00000489178 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
ALCAM-208ENST00000489178 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
ALCAM-208ENST00000489178 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
ALCAM-208ENST00000489178 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
ALCAM-208ENST00000489178 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
ALCAM-208ENST00000489178 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
ALCAM-208ENST00000489178 FBXO3Q9UK99 471 aa15.77■□□□□ 0.12
ALCAM-208ENST00000489178 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
ALCAM-208ENST00000489178 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
ALCAM-208ENST00000489178 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
ALCAM-208ENST00000489178 PIP4P2Q8N4L2 257 aa15.58■□□□□ 0.08
ALCAM-208ENST00000489178 VASPP50552 380 aaPredicted RBP15.57■□□□□ 0.08
ALCAM-208ENST00000489178 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
ALCAM-208ENST00000489178 MIER1Q8N108 512 aa15.48■□□□□ 0.07
ALCAM-208ENST00000489178 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
ALCAM-208ENST00000489178 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
ALCAM-208ENST00000489178 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
ALCAM-208ENST00000489178 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
ALCAM-208ENST00000489178 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
ALCAM-208ENST00000489178 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
ALCAM-208ENST00000489178 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
ALCAM-208ENST00000489178 POTEHQ6S545 545 aa15.31■□□□□ 0.04
ALCAM-208ENST00000489178 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
ALCAM-208ENST00000489178 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
ALCAM-208ENST00000489178 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
ALCAM-208ENST00000489178 NUBP1P53384 320 aa15.2■□□□□ 0.02
ALCAM-208ENST00000489178 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
ALCAM-208ENST00000489178 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
ALCAM-208ENST00000489178 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
ALCAM-208ENST00000489178 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
ALCAM-208ENST00000489178 HAX1O00165 279 aa15□□□□□ -0.01
ALCAM-208ENST00000489178 EVX2Q03828 476 aa14.99□□□□□ -0.01
ALCAM-208ENST00000489178 FAM212AQ96EL1 285 aa14.97□□□□□ -0.01
ALCAM-208ENST00000489178 GSE1Q14687 1217 aa14.95□□□□□ -0.02
ALCAM-208ENST00000489178 TSPYL2Q9H2G4 693 aaPredicted RBP14.94□□□□□ -0.02
ALCAM-208ENST00000489178 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
ALCAM-208ENST00000489178 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
ALCAM-208ENST00000489178 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms