RNA–Protein interactions for RNA: ENST00000488930.5

NCK1-210, Transcript of NCK adaptor protein 1, humanhuman

TSL 5

Gene NCK1, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-210ENST00000488930 AEBP2Q6ZN18 517 aaPredicted RBP11.88□□□□□ -0.51
NCK1-210ENST00000488930 CHIC1Q5VXU3 224 aa11.59□□□□□ -0.55
NCK1-210ENST00000488930 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.77
NCK1-210ENST00000488930 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
NCK1-210ENST00000488930 FOXD1Q16676 465 aa9.5□□□□□ -0.89
NCK1-210ENST00000488930 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
NCK1-210ENST00000488930 MSH5O43196 834 aa9.02□□□□□ -0.97
NCK1-210ENST00000488930 POTEDQ86YR6 584 aa9.01□□□□□ -0.97
NCK1-210ENST00000488930 PPP6R1Q9UPN7 881 aa8.9□□□□□ -0.98
NCK1-210ENST00000488930 PIAS4Q8N2W9 510 aaPredicted RBP8.89□□□□□ -0.99
NCK1-210ENST00000488930 ADRA2BP18089 450 aa8.85□□□□□ -0.99
NCK1-210ENST00000488930 SCAF1Q9H7N4 1312 aaKnown RBP8.31□□□□□ -1.08
NCK1-210ENST00000488930 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
NCK1-210ENST00000488930 DMRT2Q9Y5R5 561 aa8.15□□□□□ -1.1
NCK1-210ENST00000488930 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
NCK1-210ENST00000488930 CNKSR2Q8WXI2 1034 aa8.04□□□□□ -1.12
NCK1-210ENST00000488930 NCBP3Q53F19 620 aaKnown RBP8.01□□□□□ -1.13
NCK1-210ENST00000488930 HOXD11P31277 338 aaPredicted RBP7.96□□□□□ -1.14
NCK1-210ENST00000488930 RNF216Q9NWF9 866 aaPredicted RBP7.95□□□□□ -1.14
NCK1-210ENST00000488930 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
NCK1-210ENST00000488930 NPM3O75607 178 aaKnown RBP7.79□□□□□ -1.16
NCK1-210ENST00000488930 DCAF8L1A6NGE4 600 aa7.77□□□□□ -1.17
NCK1-210ENST00000488930 KCNA4P22459 653 aa7.75□□□□□ -1.17
NCK1-210ENST00000488930 CACNB1Q02641 598 aaPredicted RBP7.75□□□□□ -1.17
NCK1-210ENST00000488930 RNF39Q9H2S5 420 aa7.63□□□□□ -1.19
NCK1-210ENST00000488930 C1QBPQ07021 282 aaKnown RBP7.57□□□□□ -1.2
NCK1-210ENST00000488930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.46□□□□□ -1.223e-8■■■□□ 14.9
NCK1-210ENST00000488930 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
NCK1-210ENST00000488930 SLC4A2P04920 1241 aa7.38□□□□□ -1.23
NCK1-210ENST00000488930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.37□□□□□ -1.23
NCK1-210ENST00000488930 HNRNPUL2Q1KMD3 747 aaKnown RBP7.37□□□□□ -1.23
NCK1-210ENST00000488930 APLP2Q06481 763 aa7.34□□□□□ -1.23
NCK1-210ENST00000488930 U3KPZ7 1027 aaPredicted RBP7.34□□□□□ -1.23
NCK1-210ENST00000488930 SAMD1Q6SPF0 538 aaPredicted RBP7.29□□□□□ -1.24
NCK1-210ENST00000488930 MYCNP04198 464 aaPredicted RBP7.28□□□□□ -1.24
NCK1-210ENST00000488930 FOXD4L1Q9NU39 408 aa7.28□□□□□ -1.24
NCK1-210ENST00000488930 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
NCK1-210ENST00000488930 CAPN15O75808 1086 aa7.16□□□□□ -1.26
NCK1-210ENST00000488930 ATXN8OSP0DMR3 200 aa7.15□□□□□ -1.26
NCK1-210ENST00000488930 ZBTB22O15209 634 aa7.11□□□□□ -1.27
NCK1-210ENST00000488930 DSG3P32926 999 aa7.11□□□□□ -1.27
NCK1-210ENST00000488930 SPINK5Q9NQ38 1064 aaPredicted RBP7.11□□□□□ -1.27
NCK1-210ENST00000488930 TRHP20396 242 aaPredicted RBP7.02□□□□□ -1.29
NCK1-210ENST00000488930 CSRNP3Q8WYN3 585 aa7□□□□□ -1.29
NCK1-210ENST00000488930 ZBTB12Q9Y330 459 aaPredicted RBP6.97□□□□□ -1.29
NCK1-210ENST00000488930 ABCB7O75027 752 aa6.94□□□□□ -1.3
NCK1-210ENST00000488930 POTEHQ6S545 545 aa6.94□□□□□ -1.3
NCK1-210ENST00000488930 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
NCK1-210ENST00000488930 POLA2Q14181 598 aa6.91□□□□□ -1.3
NCK1-210ENST00000488930 RBM42Q9BTD8 480 aaKnown RBP6.89□□□□□ -1.31
NCK1-210ENST00000488930 EHMT2Q96KQ7 1210 aa6.88□□□□□ -1.31
NCK1-210ENST00000488930 FBLN2P98095 1184 aa6.79□□□□□ -1.32
NCK1-210ENST00000488930 SPDYE2BA6NHP3 402 aa6.72□□□□□ -1.33
NCK1-210ENST00000488930 SPDYE6P0CI01 402 aa6.72□□□□□ -1.33
NCK1-210ENST00000488930 SPDYE2Q495Y8 402 aa6.72□□□□□ -1.33
NCK1-210ENST00000488930 AKT1S1Q96B36 256 aa6.72□□□□□ -1.33
NCK1-210ENST00000488930 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
NCK1-210ENST00000488930 MKRN4PQ13434 485 aaPredicted RBP6.68□□□□□ -1.34
NCK1-210ENST00000488930 OSCARQ8IYS5 282 aa6.66□□□□□ -1.34
NCK1-210ENST00000488930 SSUH2Q9Y2M2 353 aa6.64□□□□□ -1.35
NCK1-210ENST00000488930 REM2Q8IYK8 340 aaPredicted RBP6.58□□□□□ -1.36
NCK1-210ENST00000488930 ZNF692Q9BU19 519 aaPredicted RBP6.57□□□□□ -1.36
NCK1-210ENST00000488930 SPDYE1Q8NFV5 336 aaPredicted RBP6.53□□□□□ -1.36
NCK1-210ENST00000488930 SPDYE4A6NLX3 237 aa6.49□□□□□ -1.37
NCK1-210ENST00000488930 PROM2Q8N271 834 aa6.49□□□□□ -1.37
NCK1-210ENST00000488930 PIP4P2Q8N4L2 257 aa6.49□□□□□ -1.37
NCK1-210ENST00000488930 PITPNM1O00562 1244 aa6.48□□□□□ -1.37
NCK1-210ENST00000488930 SP7Q8TDD2 431 aaPredicted RBP6.48□□□□□ -1.37
NCK1-210ENST00000488930 STAG3Q9UJ98 1225 aa6.47□□□□□ -1.37
NCK1-210ENST00000488930 FXR2P51116 673 aaKnown RBP eCLIP6.46□□□□□ -1.38
NCK1-210ENST00000488930 PABPN1Q86U42 306 aaKnown RBP eCLIP6.46□□□□□ -1.38
NCK1-210ENST00000488930 HAX1O00165 279 aa6.43□□□□□ -1.38
NCK1-210ENST00000488930 CLEC11AQ9Y240 323 aa6.37□□□□□ -1.39
NCK1-210ENST00000488930 PRR29P0C7W0 189 aa6.36□□□□□ -1.39
NCK1-210ENST00000488930 PRKAR2AP13861 404 aaKnown RBP6.33□□□□□ -1.4
NCK1-210ENST00000488930 FKBP8Q14318 412 aa6.29□□□□□ -1.4
NCK1-210ENST00000488930 FBXO3Q9UK99 471 aa6.28□□□□□ -1.4
NCK1-210ENST00000488930 CLCN6P51797 869 aa6.27□□□□□ -1.41
NCK1-210ENST00000488930 C19orf67A6NJJ6 358 aa6.25□□□□□ -1.41
NCK1-210ENST00000488930 CREBZFQ9NS37 354 aa6.25□□□□□ -1.41
NCK1-210ENST00000488930 EVX2Q03828 476 aa6.24□□□□□ -1.41
NCK1-210ENST00000488930 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
NCK1-210ENST00000488930 PLEKHG5O94827 1062 aa6.23□□□□□ -1.41
NCK1-210ENST00000488930 ZBTB47Q9UFB7 747 aaPredicted RBP6.22□□□□□ -1.41
NCK1-210ENST00000488930 NPM1P06748 294 aaKnown RBP eCLIP6.21□□□□□ -1.42
NCK1-210ENST00000488930 MNX1P50219 401 aaPredicted RBP6.21□□□□□ -1.42
NCK1-210ENST00000488930 CHADLQ6NUI6 762 aa6.2□□□□□ -1.42
NCK1-210ENST00000488930 GABBR2O75899 941 aa6.17□□□□□ -1.42
NCK1-210ENST00000488930 CD44P16070 742 aaKnown RBP6.14□□□□□ -1.43
NCK1-210ENST00000488930 PAK3O75914 559 aaPredicted RBP6.13□□□□□ -1.43
NCK1-210ENST00000488930 MIER1Q8N108 512 aa6.13□□□□□ -1.43
NCK1-210ENST00000488930 ZNF579Q8NAF0 562 aaKnown RBP6.13□□□□□ -1.43
NCK1-210ENST00000488930 PLCD3Q8N3E9 789 aa6.11□□□□□ -1.43
NCK1-210ENST00000488930 VASPP50552 380 aaPredicted RBP6.1□□□□□ -1.43
NCK1-210ENST00000488930 LHX8Q68G74 356 aa6.08□□□□□ -1.44
NCK1-210ENST00000488930 NUBP1P53384 320 aa6.05□□□□□ -1.44
NCK1-210ENST00000488930 DCBLD2Q96PD2 775 aa6.05□□□□□ -1.44
NCK1-210ENST00000488930 SGIP1Q9BQI5 828 aa6.05□□□□□ -1.44
NCK1-210ENST00000488930 ZRANB1Q9UGI0 708 aa6.05□□□□□ -1.44
NCK1-210ENST00000488930 CCDC61Q9Y6R9 512 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms