RNA–Protein interactions for RNA: ENST00000488587.1

U2SURP-212, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-212ENST00000488587 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
U2SURP-212ENST00000488587 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
U2SURP-212ENST00000488587 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
U2SURP-212ENST00000488587 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
U2SURP-212ENST00000488587 FOXD1Q16676 465 aa20.44■□□□□ 0.86
U2SURP-212ENST00000488587 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
U2SURP-212ENST00000488587 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
U2SURP-212ENST00000488587 ADRA2BP18089 450 aa19.4■□□□□ 0.7
U2SURP-212ENST00000488587 PIAS4Q8N2W9 510 aaPredicted RBP19.23■□□□□ 0.67
U2SURP-212ENST00000488587 MSH5O43196 834 aa19■□□□□ 0.63
U2SURP-212ENST00000488587 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
U2SURP-212ENST00000488587 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
U2SURP-212ENST00000488587 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
U2SURP-212ENST00000488587 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
U2SURP-212ENST00000488587 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
U2SURP-212ENST00000488587 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
U2SURP-212ENST00000488587 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
U2SURP-212ENST00000488587 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
U2SURP-212ENST00000488587 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
U2SURP-212ENST00000488587 KCNA4P22459 653 aa16.94■□□□□ 0.3
U2SURP-212ENST00000488587 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
U2SURP-212ENST00000488587 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
U2SURP-212ENST00000488587 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
U2SURP-212ENST00000488587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.192e-10■■□□□ 12.2
U2SURP-212ENST00000488587 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
U2SURP-212ENST00000488587 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
U2SURP-212ENST00000488587 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
U2SURP-212ENST00000488587 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
U2SURP-212ENST00000488587 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
U2SURP-212ENST00000488587 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
U2SURP-212ENST00000488587 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
U2SURP-212ENST00000488587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
U2SURP-212ENST00000488587 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
U2SURP-212ENST00000488587 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
U2SURP-212ENST00000488587 ZBTB22O15209 634 aa15.63■□□□□ 0.09
U2SURP-212ENST00000488587 APLP2Q06481 763 aa15.58■□□□□ 0.08
U2SURP-212ENST00000488587 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
U2SURP-212ENST00000488587 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
U2SURP-212ENST00000488587 CAPN15O75808 1086 aa15.56■□□□□ 0.08
U2SURP-212ENST00000488587 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
U2SURP-212ENST00000488587 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
U2SURP-212ENST00000488587 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
U2SURP-212ENST00000488587 DSG3P32926 999 aa15.34■□□□□ 0.05
U2SURP-212ENST00000488587 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
U2SURP-212ENST00000488587 ABCB7O75027 752 aa15.23■□□□□ 0.03
U2SURP-212ENST00000488587 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
U2SURP-212ENST00000488587 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
U2SURP-212ENST00000488587 POLA2Q14181 598 aa15.07■□□□□ 0
U2SURP-212ENST00000488587 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
U2SURP-212ENST00000488587 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
U2SURP-212ENST00000488587 FBLN2P98095 1184 aa14.64□□□□□ -0.07
U2SURP-212ENST00000488587 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
U2SURP-212ENST00000488587 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
U2SURP-212ENST00000488587 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
U2SURP-212ENST00000488587 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
U2SURP-212ENST00000488587 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
U2SURP-212ENST00000488587 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
U2SURP-212ENST00000488587 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
U2SURP-212ENST00000488587 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
U2SURP-212ENST00000488587 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
U2SURP-212ENST00000488587 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
U2SURP-212ENST00000488587 SPDYE4A6NLX3 237 aa14.09□□□□□ -0.15
U2SURP-212ENST00000488587 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
U2SURP-212ENST00000488587 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
U2SURP-212ENST00000488587 POTEHQ6S545 545 aa14.06□□□□□ -0.16
U2SURP-212ENST00000488587 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
U2SURP-212ENST00000488587 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
U2SURP-212ENST00000488587 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
U2SURP-212ENST00000488587 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
U2SURP-212ENST00000488587 FKBP8Q14318 412 aa13.85□□□□□ -0.19
U2SURP-212ENST00000488587 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
U2SURP-212ENST00000488587 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
U2SURP-212ENST00000488587 PROM2Q8N271 834 aa13.77□□□□□ -0.21
U2SURP-212ENST00000488587 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
U2SURP-212ENST00000488587 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
U2SURP-212ENST00000488587 HAX1O00165 279 aa13.56□□□□□ -0.24
U2SURP-212ENST00000488587 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
U2SURP-212ENST00000488587 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
U2SURP-212ENST00000488587 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
U2SURP-212ENST00000488587 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
U2SURP-212ENST00000488587 MIER1Q8N108 512 aa13.41□□□□□ -0.26
U2SURP-212ENST00000488587 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
U2SURP-212ENST00000488587 EVX2Q03828 476 aa13.38□□□□□ -0.27
U2SURP-212ENST00000488587 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
U2SURP-212ENST00000488587 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
U2SURP-212ENST00000488587 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
U2SURP-212ENST00000488587 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
U2SURP-212ENST00000488587 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
U2SURP-212ENST00000488587 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
U2SURP-212ENST00000488587 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
U2SURP-212ENST00000488587 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
U2SURP-212ENST00000488587 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
U2SURP-212ENST00000488587 GABBR2O75899 941 aa13.13□□□□□ -0.31
U2SURP-212ENST00000488587 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
U2SURP-212ENST00000488587 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
U2SURP-212ENST00000488587 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
U2SURP-212ENST00000488587 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
U2SURP-212ENST00000488587 CLCN6P51797 869 aa13.08□□□□□ -0.32
U2SURP-212ENST00000488587 NUBP1P53384 320 aa13.06□□□□□ -0.32
U2SURP-212ENST00000488587 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms