RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
EPB41-211ENST00000488277 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
EPB41-211ENST00000488277 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
EPB41-211ENST00000488277 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
EPB41-211ENST00000488277 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
EPB41-211ENST00000488277 FOXD1Q16676 465 aa10.85□□□□□ -0.67
EPB41-211ENST00000488277 ADRA2BP18089 450 aa10.43□□□□□ -0.74
EPB41-211ENST00000488277 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
EPB41-211ENST00000488277 PIAS4Q8N2W9 510 aaPredicted RBP10.25□□□□□ -0.77
EPB41-211ENST00000488277 MSH5O43196 834 aa10.01□□□□□ -0.81
EPB41-211ENST00000488277 PPP4R3CPQ6ZMV5 832 aa9.62□□□□□ -0.87
EPB41-211ENST00000488277 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
EPB41-211ENST00000488277 MAPK8IP2Q13387 824 aaPredicted RBP9.46□□□□□ -0.9
EPB41-211ENST00000488277 KCNA4P22459 653 aa9.4□□□□□ -0.9
EPB41-211ENST00000488277 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
EPB41-211ENST00000488277 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
EPB41-211ENST00000488277 DMRT2Q9Y5R5 561 aa9.33□□□□□ -0.92
EPB41-211ENST00000488277 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
EPB41-211ENST00000488277 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
EPB41-211ENST00000488277 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
EPB41-211ENST00000488277 POTEDQ86YR6 584 aa9.12□□□□□ -0.95
EPB41-211ENST00000488277 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
EPB41-211ENST00000488277 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.98
EPB41-211ENST00000488277 DNAJC5BQ9UF47 199 aa8.92□□□□□ -0.98
EPB41-211ENST00000488277 EHMT2Q96KQ7 1210 aa8.72□□□□□ -1.01
EPB41-211ENST00000488277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.016e-19■□□□□ 9.1
EPB41-211ENST00000488277 SLC4A2P04920 1241 aa8.71□□□□□ -1.02
EPB41-211ENST00000488277 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
EPB41-211ENST00000488277 ZBTB22O15209 634 aa8.64□□□□□ -1.03
EPB41-211ENST00000488277 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
EPB41-211ENST00000488277 RNF39Q9H2S5 420 aa8.57□□□□□ -1.04
EPB41-211ENST00000488277 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
EPB41-211ENST00000488277 MYCNP04198 464 aaPredicted RBP8.54□□□□□ -1.04
EPB41-211ENST00000488277 C1QBPQ07021 282 aaKnown RBP8.47□□□□□ -1.05
EPB41-211ENST00000488277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
EPB41-211ENST00000488277 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
EPB41-211ENST00000488277 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
EPB41-211ENST00000488277 APLP2Q06481 763 aa8.38□□□□□ -1.07
EPB41-211ENST00000488277 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
EPB41-211ENST00000488277 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
EPB41-211ENST00000488277 SPINK5Q9NQ38 1064 aaPredicted RBP8.33□□□□□ -1.08
EPB41-211ENST00000488277 CAPN15O75808 1086 aa8.32□□□□□ -1.08
EPB41-211ENST00000488277 ATF5Q9Y2D1 282 aaPredicted RBP8.3□□□□□ -1.08
EPB41-211ENST00000488277 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
EPB41-211ENST00000488277 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
EPB41-211ENST00000488277 ABCB7O75027 752 aa8.17□□□□□ -1.1
EPB41-211ENST00000488277 DSG3P32926 999 aa8.16□□□□□ -1.1
EPB41-211ENST00000488277 POLA2Q14181 598 aa8.13□□□□□ -1.11
EPB41-211ENST00000488277 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
EPB41-211ENST00000488277 FBLN2P98095 1184 aa7.98□□□□□ -1.13
EPB41-211ENST00000488277 MKRN4PQ13434 485 aaPredicted RBP7.94□□□□□ -1.14
EPB41-211ENST00000488277 OSCARQ8IYS5 282 aa7.87□□□□□ -1.15
EPB41-211ENST00000488277 FKBP8Q14318 412 aa7.79□□□□□ -1.16
EPB41-211ENST00000488277 RBM42Q9BTD8 480 aaKnown RBP7.78□□□□□ -1.16
EPB41-211ENST00000488277 SPDYE2BA6NHP3 402 aa7.77□□□□□ -1.17
EPB41-211ENST00000488277 SPDYE4A6NLX3 237 aa7.77□□□□□ -1.17
EPB41-211ENST00000488277 SPDYE6P0CI01 402 aa7.77□□□□□ -1.17
EPB41-211ENST00000488277 SPDYE2Q495Y8 402 aa7.77□□□□□ -1.17
EPB41-211ENST00000488277 ZNF692Q9BU19 519 aaPredicted RBP7.75□□□□□ -1.17
EPB41-211ENST00000488277 SSUH2Q9Y2M2 353 aa7.71□□□□□ -1.18
EPB41-211ENST00000488277 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
EPB41-211ENST00000488277 PABPN1Q86U42 306 aaKnown RBP eCLIP7.65□□□□□ -1.18
EPB41-211ENST00000488277 REM2Q8IYK8 340 aaPredicted RBP7.61□□□□□ -1.19
EPB41-211ENST00000488277 PROM2Q8N271 834 aa7.61□□□□□ -1.19
EPB41-211ENST00000488277 SPDYE1Q8NFV5 336 aaPredicted RBP7.56□□□□□ -1.2
EPB41-211ENST00000488277 CLEC11AQ9Y240 323 aa7.54□□□□□ -1.2
EPB41-211ENST00000488277 PITPNM1O00562 1244 aa7.53□□□□□ -1.2
EPB41-211ENST00000488277 STAG3Q9UJ98 1225 aa7.51□□□□□ -1.21
EPB41-211ENST00000488277 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
EPB41-211ENST00000488277 PRR29P0C7W0 189 aa7.46□□□□□ -1.22
EPB41-211ENST00000488277 CHRDL2Q6WN34 429 aa7.46□□□□□ -1.22
EPB41-211ENST00000488277 VASPP50552 380 aaPredicted RBP7.4□□□□□ -1.22
EPB41-211ENST00000488277 MIER1Q8N108 512 aa7.38□□□□□ -1.23
EPB41-211ENST00000488277 FXR2P51116 673 aaKnown RBP eCLIP7.37□□□□□ -1.23
EPB41-211ENST00000488277 PLCD3Q8N3E9 789 aa7.37□□□□□ -1.23
EPB41-211ENST00000488277 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
EPB41-211ENST00000488277 PLEKHG5O94827 1062 aa7.35□□□□□ -1.23
EPB41-211ENST00000488277 CHADLQ6NUI6 762 aa7.35□□□□□ -1.23
EPB41-211ENST00000488277 CREBZFQ9NS37 354 aa7.35□□□□□ -1.23
EPB41-211ENST00000488277 PRKAR2AP13861 404 aaKnown RBP7.34□□□□□ -1.23
EPB41-211ENST00000488277 IFNLR1Q8IU57 520 aaPredicted RBP7.29□□□□□ -1.24
EPB41-211ENST00000488277 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
EPB41-211ENST00000488277 ZBTB47Q9UFB7 747 aaPredicted RBP7.28□□□□□ -1.24
EPB41-211ENST00000488277 MNX1P50219 401 aaPredicted RBP7.26□□□□□ -1.25
EPB41-211ENST00000488277 FARP1Q9Y4F1 1045 aaPredicted RBP7.26□□□□□ -1.25
EPB41-211ENST00000488277 NPM1P06748 294 aaKnown RBP eCLIP7.24□□□□□ -1.25
EPB41-211ENST00000488277 POTEHQ6S545 545 aa7.23□□□□□ -1.25
EPB41-211ENST00000488277 SPOCK2Q92563 424 aa7.22□□□□□ -1.25
EPB41-211ENST00000488277 NUBP1P53384 320 aa7.17□□□□□ -1.26
EPB41-211ENST00000488277 RASEFQ8IZ41 740 aa7.15□□□□□ -1.26
EPB41-211ENST00000488277 HAX1O00165 279 aa7.14□□□□□ -1.27
EPB41-211ENST00000488277 FAM212AQ96EL1 285 aa7.14□□□□□ -1.27
EPB41-211ENST00000488277 PAK3O75914 559 aaPredicted RBP7.13□□□□□ -1.27
EPB41-211ENST00000488277 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
EPB41-211ENST00000488277 DCAF8Q5TAQ9 597 aa7.13□□□□□ -1.27
EPB41-211ENST00000488277 TSPYL2Q9H2G4 693 aaPredicted RBP7.13□□□□□ -1.27
EPB41-211ENST00000488277 C19orf67A6NJJ6 358 aa7.12□□□□□ -1.27
EPB41-211ENST00000488277 CIZ1Q9ULV3 898 aaPredicted RBP7.12□□□□□ -1.27
EPB41-211ENST00000488277 GSE1Q14687 1217 aa7.1□□□□□ -1.27
EPB41-211ENST00000488277 ZRANB1Q9UGI0 708 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms