RNA–Protein interactions for RNA: ENST00000486940.2

COG3-204, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 2

Gene COG3, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-204ENST00000486940 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
COG3-204ENST00000486940 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
COG3-204ENST00000486940 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
COG3-204ENST00000486940 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
COG3-204ENST00000486940 FOXD1Q16676 465 aa19.66■□□□□ 0.74
COG3-204ENST00000486940 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
COG3-204ENST00000486940 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
COG3-204ENST00000486940 ADRA2BP18089 450 aa18.63■□□□□ 0.57
COG3-204ENST00000486940 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
COG3-204ENST00000486940 MSH5O43196 834 aa18.36■□□□□ 0.53
COG3-204ENST00000486940 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
COG3-204ENST00000486940 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
COG3-204ENST00000486940 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
COG3-204ENST00000486940 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
COG3-204ENST00000486940 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
COG3-204ENST00000486940 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
COG3-204ENST00000486940 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
COG3-204ENST00000486940 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
COG3-204ENST00000486940 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
COG3-204ENST00000486940 KCNA4P22459 653 aa16.25■□□□□ 0.19
COG3-204ENST00000486940 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
COG3-204ENST00000486940 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
COG3-204ENST00000486940 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
COG3-204ENST00000486940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■□□□ 13.2
COG3-204ENST00000486940 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
COG3-204ENST00000486940 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
COG3-204ENST00000486940 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
COG3-204ENST00000486940 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
COG3-204ENST00000486940 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
COG3-204ENST00000486940 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
COG3-204ENST00000486940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
COG3-204ENST00000486940 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
COG3-204ENST00000486940 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
COG3-204ENST00000486940 APLP2Q06481 763 aa15.09■□□□□ 0.01
COG3-204ENST00000486940 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
COG3-204ENST00000486940 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
COG3-204ENST00000486940 CAPN15O75808 1086 aa14.98□□□□□ -0.01
COG3-204ENST00000486940 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
COG3-204ENST00000486940 ZBTB22O15209 634 aa14.9□□□□□ -0.02
COG3-204ENST00000486940 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
COG3-204ENST00000486940 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
COG3-204ENST00000486940 DSG3P32926 999 aa14.76□□□□□ -0.05
COG3-204ENST00000486940 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
COG3-204ENST00000486940 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
COG3-204ENST00000486940 ABCB7O75027 752 aa14.62□□□□□ -0.07
COG3-204ENST00000486940 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
COG3-204ENST00000486940 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
COG3-204ENST00000486940 POLA2Q14181 598 aa14.5□□□□□ -0.09
COG3-204ENST00000486940 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
COG3-204ENST00000486940 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
COG3-204ENST00000486940 FBLN2P98095 1184 aa14.13□□□□□ -0.15
COG3-204ENST00000486940 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
COG3-204ENST00000486940 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
COG3-204ENST00000486940 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
COG3-204ENST00000486940 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
COG3-204ENST00000486940 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
COG3-204ENST00000486940 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
COG3-204ENST00000486940 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
COG3-204ENST00000486940 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
COG3-204ENST00000486940 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
COG3-204ENST00000486940 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
COG3-204ENST00000486940 POTEHQ6S545 545 aa13.57□□□□□ -0.24
COG3-204ENST00000486940 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
COG3-204ENST00000486940 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
COG3-204ENST00000486940 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
COG3-204ENST00000486940 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
COG3-204ENST00000486940 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
COG3-204ENST00000486940 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
COG3-204ENST00000486940 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
COG3-204ENST00000486940 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
COG3-204ENST00000486940 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
COG3-204ENST00000486940 PROM2Q8N271 834 aa13.26□□□□□ -0.29
COG3-204ENST00000486940 FKBP8Q14318 412 aa13.25□□□□□ -0.29
COG3-204ENST00000486940 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
COG3-204ENST00000486940 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
COG3-204ENST00000486940 HAX1O00165 279 aa13.07□□□□□ -0.32
COG3-204ENST00000486940 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
COG3-204ENST00000486940 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
COG3-204ENST00000486940 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
COG3-204ENST00000486940 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
COG3-204ENST00000486940 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
COG3-204ENST00000486940 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
COG3-204ENST00000486940 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
COG3-204ENST00000486940 MIER1Q8N108 512 aa12.9□□□□□ -0.34
COG3-204ENST00000486940 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
COG3-204ENST00000486940 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
COG3-204ENST00000486940 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
COG3-204ENST00000486940 EVX2Q03828 476 aa12.83□□□□□ -0.36
COG3-204ENST00000486940 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
COG3-204ENST00000486940 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
COG3-204ENST00000486940 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
COG3-204ENST00000486940 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
COG3-204ENST00000486940 CLCN6P51797 869 aa12.69□□□□□ -0.38
COG3-204ENST00000486940 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
COG3-204ENST00000486940 GABBR2O75899 941 aa12.63□□□□□ -0.39
COG3-204ENST00000486940 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
COG3-204ENST00000486940 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
COG3-204ENST00000486940 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
COG3-204ENST00000486940 NUBP1P53384 320 aa12.55□□□□□ -0.4
COG3-204ENST00000486940 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms